RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NXF3Q9H4D5 531 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 TTC12Q9H892 705 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 BRMS1Q9HCU9 246 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 GPRC5CQ9NQ84 441 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 FAM86C1Q9NVL1 165 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 MIOSQ9NXC5 875 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 PCDHA12Q9UN75 941 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 FAN1Q9Y2M0 1017 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 IRAK3Q9Y616 596 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 DOCK6Q96HP0 2047 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 MYO15AQ9UKN7 3530 aa16.92■□□□□ 0.3
PRKCSH-204ENST00000587290 NEMFO60524 1076 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 USO1O60763 962 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 ITGA4P13612 1032 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 NCLP19338 710 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 MTHFRP42898 656 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 OR1G1P47890 313 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 SCNN1GP51170 649 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 PTENP60484 403 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 MBTD1Q05BQ5 628 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 AMHR2Q16671 573 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 TDRD5Q8NAT2 981 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 RABGGTAQ92696 567 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 B3GALT6Q96L58 329 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 RIPOR3Q96MK2 946 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 NECTIN4Q96NY8 510 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 FAM193BQ96PV7 902 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 HSD17B14Q9BPX1 270 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 DZANK1Q9NVP4 752 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 CACNG4Q9UBN1 327 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 DBR1Q9UK59 544 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 PPME1Q9Y570 386 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 CNTNAP2Q9UHC6 1331 aa16.91■□□□□ 0.3
PRKCSH-204ENST00000587290 DOCK8Q8NF50 2099 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 MTCL1Q9Y4B5 1905 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 ARL5CA6NH57 179 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 SEC24BO95487 1268 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 ARF4P18085 180 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 GLRA2P23416 452 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 KLRC2P26717 231 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 RARRES1P49788 294 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 CLCN4P51793 760 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 EXOC8Q8IYI6 725 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 COLGALT2Q8IYK4 626 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 RSPH1Q8WYR4 309 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 POLR3FQ9H1D9 316 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 LIMD1Q9UGP4 676 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 SORCS3Q9UPU3 1222 aa16.9■□□□□ 0.3
PRKCSH-204ENST00000587290 TRIP11Q15643 1979 aa16.89■□□□□ 0.3
PRKCSH-204ENST00000587290 ASAP2O43150 1006 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 LILRB3O75022 631 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 ALDH2P05091 517 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 AKAP5P24588 427 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 AVPR2P30518 371 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 MCM7P33993 719 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 ARL2P36404 184 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 NEK4P51957 841 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 MXD4Q14582 209 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 ATAT1Q5SQI0 421 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 NOTUMQ6P988 496 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 CCDC43Q96MW1 224 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 MTMR9Q96QG7 549 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 CSRNP2Q9H175 543 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 KLK14Q9P0G3 267 aa16.89■□□□□ 0.29
PRKCSH-204ENST00000587290 TTLL13PA6NNM8 815 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 LYPLA2O95372 231 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 NPTXRO95502 500 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 PTPN5P54829 565 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 DSC1Q08554 894 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 MTMR3Q13615 1198 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 GIT2Q14161 759 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 TFDP1Q14186 410 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 HERC2P3Q9BVR0 1158 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 EMILIN2Q9BXX0 1053 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 SFXN1Q9H9B4 322 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 MAN1C1Q9NR34 630 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 MRPL17Q9NRX2 175 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 ANKEF1Q9NU02 776 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 KANSL3Q9P2N6 904 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 USP20Q9Y2K6 914 aa16.88■□□□□ 0.29
PRKCSH-204ENST00000587290 LRRIQ4A6NIV6 560 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 MED24O75448 989 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 DGAT1O75907 488 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 SOD2P04179 222 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 URODP06132 367 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 SPATA31D3P0C874 917 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 SPATA31C1P0DKV0 1188 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 TRIM29Q14134 588 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 SPATA31D4Q6ZUB0 917 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 GPR149Q86SP6 731 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 IFNLR1Q8IU57 520 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 GLYCTKQ8IVS8 523 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 TRIM6Q9C030 488 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 VWA8A3KMH1 1905 aa16.87■□□□□ 0.29
PRKCSH-204ENST00000587290 TEX28O15482 410 aa16.86■□□□□ 0.29
PRKCSH-204ENST00000587290 RFPL2O75678 378 aa16.86■□□□□ 0.29
PRKCSH-204ENST00000587290 AXLP30530 894 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms