RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 IGKV6D-21A0A0A0MT36 114 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 NRP1O14786 923 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 PAPSS2O95340 614 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 ATG7O95352 703 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 SEC24BO95487 1268 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 MCMDC2Q4G0Z9 681 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 CACNA2D4Q7Z3S7 1137 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 LURAP1LQ8IV03 231 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 NPAS3Q8IXF0 933 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 CKAP2LQ8IYA6 745 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 FAM227BQ96M60 508 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 TRAIPQ9BWF2 469 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 KLK13Q9UKR3 277 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 POLIQ9UNA4 740 aa14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 PRG3Q9Y2Y8 225 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-211ENST00000586921 A0A0D9SFI3 127 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 ZNF213O14771 459 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 HNRNPA1P09651 372 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 TMOD1P28289 359 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 C19orf57Q0VDD7 668 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 TROAPQ12815 778 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 GAS6Q14393 721 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 LILRA6Q6PI73 481 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 TRMT1LQ7Z2T5 733 aaKnown RBP14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 ZNF589Q86UQ0 364 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 KBTBD6Q86V97 674 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 WDR5BQ86VZ2 330 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 CCDC60Q8IWA6 550 aaPredicted RBP14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 NLRP7Q8WX94 980 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 PLA2G2FQ9BZM2 168 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 BRD9Q9H8M2 597 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 ZNF302Q9NR11 478 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 FAM105AQ9NUU6 356 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 MARCH5Q9NX47 278 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 KALRNO60229 2985 aa14.37□□□□□ -0.11
SMARCA4-211ENST00000586921 HECTD1Q9ULT8 2610 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 ASXL3Q9C0F0 2248 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 MAGEB2O15479 319 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 XYLBO75191 536 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 CSDE1O75534 798 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 RPP40O75818 363 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 CHRNB1P11230 501 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 CSRP1P21291 193 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 KIF5BP33176 963 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 RAB27AP51159 221 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 GPC3P51654 580 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 GRM4Q14833 912 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 LIN9Q5TKA1 542 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 EFCAB12Q6NXP0 572 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 RNF168Q8IYW5 571 aaPredicted RBP14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 LRRC71Q8N4P6 559 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 GAB3Q8WWW8 586 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 ING5Q8WYH8 240 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 MKNK1Q9BUB5 465 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 PIN4Q9Y237 131 aaKnown RBP14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 ACACAQ13085 2346 aa14.36□□□□□ -0.11
SMARCA4-211ENST00000586921 DDX39AO00148 427 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 CCL16O15467 120 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 CCNE2O96020 404 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 RPL17P18621 184 aaKnown RBP14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 HOXA6P31267 233 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 CREMQ03060 361 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 PTGDRQ13258 359 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 ITGB3BPQ13352 177 aaPredicted RBP14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 PPM1LQ5SGD2 360 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 ABHD15Q6UXT9 468 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 PGBD4Q96DM1 585 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 B3GALT6Q96L58 329 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 FNIP2Q9P278 1114 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 KANSL3Q9P2N6 904 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 DACH1Q9UI36 760 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 CEP131Q9UPN4 1083 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 PIAS3Q9Y6X2 628 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 CELSR3Q9NYQ7 3312 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 TICRRQ7Z2Z1 1910 aa14.35□□□□□ -0.11
SMARCA4-211ENST00000586921 SPDYE3A6NKU9 549 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 ZNF623O75123 536 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 POMCP01189 267 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 MS4A1P11836 297 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 ATP4AP20648 1035 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 OR1G1P47890 313 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 AFF1P51825 1210 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 LRRC32Q14392 662 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 GRM2Q14416 872 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 PABPC1LQ4VXU2 614 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 SWSAP1Q6NVH7 229 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 LINC01465Q8N7H1 131 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 ELSPBP1Q96BH3 223 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 MBOAT7Q96N66 472 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 MXRA8Q9BRK3 442 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 CHMP4BQ9H444 224 aaKnown RBP14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 PSTPIP2Q9H939 334 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 CHST7Q9NS84 486 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 FBXW11Q9UKB1 542 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
SMARCA4-211ENST00000586921 EFEMP2O95967 443 aa14.33□□□□□ -0.12
SMARCA4-211ENST00000586921 C8AP07357 584 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms