RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PHKA2P46019 1235 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 KCNJ6P48051 423 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 PTENP60484 403 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 WDR5P61964 334 aaKnown RBP8.87□□□□□ -0.99
SMAD4-204ENST00000586253 SH3BP2P78314 561 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 PPP2R5AQ15172 486 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 NAALADL2Q58DX5 795 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 FAM102BQ5T8I3 360 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 RESP18Q5W5W9 173 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 CDCA2Q69YH5 1023 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-204ENST00000586253 SHC4Q6S5L8 630 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 FAM228AQ86W67 206 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 KSR1Q8IVT5 923 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 RNF149Q8NC42 400 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 ASAP3Q8TDY4 903 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 LRRC15Q8TF66 581 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 IPO9Q96P70 1041 aaKnown RBP8.87□□□□□ -0.99
SMAD4-204ENST00000586253 PPP1R16BQ96T49 567 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 SLC9A7Q96T83 725 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 PLIN2Q99541 437 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 FDXACB1Q9BRP7 624 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-204ENST00000586253 RUSC1Q9BVN2 902 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 CUEDC2Q9H467 287 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 FAM13BQ9NYF5 915 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 CXXC1Q9P0U4 656 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-204ENST00000586253 ODF2LQ9ULJ1 636 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 ST3GAL5Q9UNP4 418 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 SLC4A7Q9Y6M7 1214 aa8.87□□□□□ -0.99
SMAD4-204ENST00000586253 PHLPP2Q6ZVD8 1323 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 FAM237AA0A1B0GTK4 181 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-204ENST00000586253 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-204ENST00000586253 A0A1W2PQ27 194 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 A0A1W2PQ64 194 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 A0A1W2PQD8 194 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 ZBBXA8MT70 800 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 HIP1RO75146 1068 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 AMHP03971 560 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 SSBP05455 408 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMAD4-204ENST00000586253 SRGAP2CP0DJJ0 459 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 ATP2A2P16615 1042 aaKnown RBP8.86□□□□□ -0.99
SMAD4-204ENST00000586253 CMA1P23946 247 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 STAT6P42226 847 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 SMAD3P84022 425 aaKnown RBP8.86□□□□□ -0.99
SMAD4-204ENST00000586253 MAPK7Q13164 816 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 DMP1Q13316 513 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-204ENST00000586253 CAPSQ13938 189 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 CSPP1Q1MSJ5 1256 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 TCTN1Q2MV58 587 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 ARSHQ5FYA8 562 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 HABP4Q5JVS0 413 aaKnown RBP8.86□□□□□ -0.99
SMAD4-204ENST00000586253 MAEAQ7L5Y9 396 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 GPBP1Q86WP2 473 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 DAW1Q8N136 415 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 IQUBQ8NA54 791 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 IFT74Q96LB3 600 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 C2orf40Q9H1Z8 148 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 TNMDQ9H2S6 317 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 TMX1Q9H3N1 280 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 MAGEF1Q9HAY2 307 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 CHST12Q9NRB3 414 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 C1orf112Q9NSG2 853 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 MYH11P35749 1972 aa8.86□□□□□ -0.99
SMAD4-204ENST00000586253 TTC3P53804 2025 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 A0A087X0B3 334 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-204ENST00000586253 ENPP3O14638 875 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 PLS3P13797 630 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 ZSCAN20P17040 1043 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-204ENST00000586253 SCP2P22307 547 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 AXLP30530 894 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 ZNF131P52739 623 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 EFNA5P52803 228 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 MBTD1Q05BQ5 628 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 DSC3Q14574 896 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 FAM187BQ17R55 369 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 SV2BQ7L1I2 683 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 CATSPER4Q7RTX7 472 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 ZBTB8OSQ8IWT0 167 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 BSNDQ8WZ55 320 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 KCNN1Q92952 543 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 TOP1MTQ969P6 601 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 CHAMP1Q96JM3 812 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 ZNF668Q96K58 619 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-204ENST00000586253 PRIMPOLQ96LW4 560 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 NTPCRQ9BSD7 190 aaKnown RBP8.85□□□□□ -0.99
SMAD4-204ENST00000586253 TRAIPQ9BWF2 469 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 LRRC27Q9C0I9 530 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 RGS18Q9NS28 235 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 AGPAT5Q9NUQ2 364 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 KBTBD4Q9NVX7 518 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 DACT1Q9NYF0 836 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 LARSQ9P2J5 1176 aaKnown RBP8.85□□□□□ -0.99
SMAD4-204ENST00000586253 USP25Q9UHP3 1055 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 KCNH3Q9ULD8 1083 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 PTPRSQ13332 1948 aa8.85□□□□□ -0.99
SMAD4-204ENST00000586253 DENND3A2RUS2 1198 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 LRRIQ4A6NIV6 560 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 H0YCG3 227 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms