RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SCN5AQ14524 2016 aa14.93□□□□□ -0.02
VMP1-203ENST00000586245 A0A1B0GUA9 196 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 ABHD14A-ACY1A0A1B0GW23 586 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 TTLL13PA6NNM8 815 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 H0YGN5 161 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 MGEA5O60502 916 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 TOM1L1O75674 476 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 BAIAP3O94812 1187 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 PRCPP42785 496 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 MAGEA10P43363 369 aaPredicted RBP14.92□□□□□ -0.02
VMP1-203ENST00000586245 NLRP12P59046 1061 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 DSC3Q14574 896 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 ZNF568Q3ZCX4 644 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 MPZL3Q6UWV2 235 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 ZNF365Q70YC5 407 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 HS2ST1Q7LGA3 356 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 VWCEQ96DN2 955 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 TRIM6Q9C030 488 aaPredicted RBP14.92□□□□□ -0.02
VMP1-203ENST00000586245 PDZD7Q9H5P4 517 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 RGS18Q9NS28 235 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 ANKFY1Q9P2R3 1169 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 DACH1Q9UI36 760 aa14.92□□□□□ -0.02
VMP1-203ENST00000586245 ZBBXA8MT70 800 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 ENPP3O14638 875 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 PSMA7O14818 248 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 CLDN3O15551 220 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 NPTXRO95502 500 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 SKIP12755 728 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 BMP6P22004 513 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 TCTN1Q2MV58 587 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 DCAF4L1Q3SXM0 396 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 TMEM240Q5SV17 173 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 SLFN12LQ6IEE8 588 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 OTOP2Q7RTS6 562 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 CDR2LQ86X02 465 aaPredicted RBP14.91□□□□□ -0.02
VMP1-203ENST00000586245 ADSSL1Q8N142 457 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 GOLGA5Q8TBA6 731 aa14.91□□□□□ -0.02
VMP1-203ENST00000586245 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.91□□□□□ -0.02
VMP1-203ENST00000586245 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
VMP1-203ENST00000586245 MTIF3Q9H2K0 278 aaKnown RBP14.91□□□□□ -0.02
VMP1-203ENST00000586245 CGNQ9P2M7 1197 aaKnown RBP14.91□□□□□ -0.02
VMP1-203ENST00000586245 ZMYM2Q9UBW7 1377 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 ANKRD63C9JTQ0 380 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 RBAK-RBAKDNI3L0D1 243 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 CALUO43852 315 aaPredicted RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 MCF2P10911 925 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 HARSP12081 509 aaKnown RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 IBSPP21815 317 aaPredicted RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 HOXD13P35453 343 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 KCNJ6P48051 423 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 RAB27AP51159 221 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 EPHB4P54760 987 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 SNRPFP62306 86 aaKnown RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 NOLC1Q14978 699 aaKnown RBP eCLIP14.9□□□□□ -0.02
VMP1-203ENST00000586245 EEF1DP3Q658K8 133 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 ARMCX5Q6P1M9 558 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 SLC24A5Q71RS6 500 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 C16orf59Q7L2K0 433 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 ZBTB33Q86T24 672 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 HACE1Q8IYU2 909 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 MLKLQ8NB16 471 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 POMGNT1Q8WZA1 660 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 DHTKD1Q96HY7 919 aaPredicted RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 ZBTB45Q96K62 511 aaPredicted RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 TSG101Q99816 390 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 TRAIPQ9BWF2 469 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 IKZF4Q9H2S9 585 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 FAM105AQ9NUU6 356 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 TYW1Q9NV66 732 aaKnown RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 ANO10Q9NW15 660 aa14.9□□□□□ -0.02
VMP1-203ENST00000586245 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
VMP1-203ENST00000586245 A0A0U1RQF3 1178 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 PPP1R3GB7ZBB8 358 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 PDXKO00764 312 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 AMHP03971 560 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 GARTP22102 1010 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 PROZP22891 400 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 MCL1Q07820 350 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 STX1AQ16623 288 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 UBXN11Q5T124 520 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 KLHL10Q6JEL2 608 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 SLC39A4Q6P5W5 647 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 RTN4RL1Q86UN2 441 aaPredicted RBP14.89□□□□□ -0.03
VMP1-203ENST00000586245 LINC01599Q8WXQ3 324 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 HERVK_113Q902F9 699 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 EIF2AQ9BY44 585 aaKnown RBP14.89□□□□□ -0.03
VMP1-203ENST00000586245 UBE2OQ9C0C9 1292 aaKnown RBP14.89□□□□□ -0.03
VMP1-203ENST00000586245 CDT1Q9H211 546 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 KCTD10Q9H3F6 313 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 PTPRHQ9HD43 1115 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 AGPAT3Q9NRZ7 376 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 PCDHB2Q9Y5E7 798 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 STYXL1Q9Y6J8 313 aa14.89□□□□□ -0.03
VMP1-203ENST00000586245 A0A0B4J269 797 aa14.88□□□□□ -0.03
VMP1-203ENST00000586245 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.88□□□□□ -0.03
VMP1-203ENST00000586245 SYCE3A1L190 88 aa14.88□□□□□ -0.03
VMP1-203ENST00000586245 TISP43B9A030 160 aa14.88□□□□□ -0.03
VMP1-203ENST00000586245 C9IYK1 514 aa14.88□□□□□ -0.03
VMP1-203ENST00000586245 ABLIM1O14639 778 aa14.88□□□□□ -0.03
VMP1-203ENST00000586245 KIAA0391O15091 583 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms