RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MXRA8Q9BRK3 442 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CBWD1Q9BRT8 395 aa15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ACTR5Q9H9F9 607 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RPTORQ8N122 1335 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 BACH1O14867 736 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GZMAP12544 262 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 COMTP21964 271 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RPL21P46778 160 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GKAP1Q5VSY0 366 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TTC27Q6P3X3 843 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 EPS8L1Q8TE68 723 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MORC4Q8TE76 937 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PCDHB18PQ96TA0 734 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PARP2Q9UGN5 583 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 AFF2P51816 1311 aa15.29■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PHF20L1A8MW92 1017 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PMM2O15305 246 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MMP10P09238 476 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ITGB5P18084 799 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 DRD4P21917 467 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MMP13P45452 471 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MNAT1P51948 309 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SLC29A2Q14542 456 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ZNF746Q6NUN9 644 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CCDC137Q6PK04 289 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MAEAQ7L5Y9 396 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CPLX4Q7Z7G2 160 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 XXYLT1Q8NBI6 393 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CD101Q93033 1021 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CHMP6Q96FZ7 201 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ACCSQ96QU6 501 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 FAM129AQ9BZQ8 928 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 WNT8AQ9H1J5 351 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 NOCTQ9UK39 431 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 USP20Q9Y2K6 914 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MAPK13O15264 365 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PLA2G6O60733 806 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 RASSF9O75901 435 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CHRNB2P17787 502 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MESDQ14696 234 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 CYP1B1Q16678 543 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SEL1L2Q5TEA6 688 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MEX3CQ5U5Q3 659 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 FAM71AQ8IYT1 594 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 DEFB129Q9H1M3 183 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 HSPBP1Q9NZL4 362 aa15.28■□□□□ 0.04
CDK5RAP3-237ENST00000585163 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TMEM110-MUSTN1A8MSY1 372 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 DDX39AO00148 427 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SGPL1O95470 568 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 P4HBP07237 508 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ALAS1P13196 640 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PLS3P13797 630 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 HMGB2P26583 209 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 NOP9Q86U38 636 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 LDHDQ86WU2 507 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 PLEKHO2Q8TD55 490 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 KAT5Q92993 513 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 SEMA4AQ9H3S1 761 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 MTRF1LQ9UGC7 380 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 DBR1Q9UK59 544 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 TRPC6Q9Y210 931 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 ZHX2Q9Y6X8 837 aa15.27■□□□□ 0.04
CDK5RAP3-237ENST00000585163 DNM1LO00429 736 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CTNND1O60716 968 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 PYGMP11217 842 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CHN1P15882 459 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ANKRD20A8PQ5CZ79 823 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CROCCP2Q86T23 111 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 P3H4Q92791 437 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZNF317Q96PQ6 595 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TMEM109Q9BVC6 243 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ADAM7Q9H2U9 754 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZBTB21Q9ULJ3 1066 aa15.27■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RARRES1P49788 294 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MXI1P50539 228 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 MCCD1P59942 119 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 GTF2BQ00403 316 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ADCY2Q08462 1091 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SPRED3Q2MJR0 410 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 LACTB2Q53H82 288 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 C6orf118Q5T5N4 469 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ZSWIM2Q8NEG5 633 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ST6GALNAC4Q9H4F1 302 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 RGS16O15492 202 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 DHX15O43143 795 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 HSD17B4P51659 736 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SNRPFP62306 86 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 AOC3Q16853 763 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 HAUS6Q7Z4H7 955 aa15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 SLC13A5Q86YT5 568 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-237ENST00000585163 CCDC114Q96M63 670 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms