RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 RSAD1Q9HA92 442 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 MIOSQ9NXC5 875 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.33■□□□□ 0.85
TOP3A-220ENST00000585031 SEPT9Q9UHD8 586 aaPredicted RBP20.33■□□□□ 0.85
TOP3A-220ENST00000585031 CDV3Q9UKY7 258 aaKnown RBP20.33■□□□□ 0.85
TOP3A-220ENST00000585031 PCDHGA2Q9Y5H1 932 aa20.33■□□□□ 0.85
TOP3A-220ENST00000585031 ATRXP46100 2492 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 ESYT2A0FGR8 921 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 URODP06132 367 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 ADH1AP07327 375 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 SNW1Q13573 536 aaKnown RBP20.32■□□□□ 0.84
TOP3A-220ENST00000585031 LILRA6Q6PI73 481 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 PARM1Q6UWI2 310 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 ZNF410Q86VK4 478 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 URGCPQ8TCY9 931 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 SHDQ96IW2 340 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 NLRP4Q96MN2 994 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 DDX23Q9BUQ8 820 aaKnown RBP20.32■□□□□ 0.84
TOP3A-220ENST00000585031 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 AGPAT5Q9NUQ2 364 aa20.32■□□□□ 0.84
TOP3A-220ENST00000585031 GOLGA8AA7E2F4 631 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 GOLGA8BA8MQT2 603 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 TGM5O43548 720 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 LILRB5O75023 590 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 MAFO75444 373 aaPredicted RBP20.31■□□□□ 0.84
TOP3A-220ENST00000585031 CDC42EP1Q00587 391 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 B3GNT9Q6UX72 402 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 REXO1Q8N1G1 1221 aaKnown RBP20.31■□□□□ 0.84
TOP3A-220ENST00000585031 SMG8Q8ND04 991 aaKnown RBP20.31■□□□□ 0.84
TOP3A-220ENST00000585031 PGBD4Q96DM1 585 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 EPC1Q9H2F5 836 aa20.31■□□□□ 0.84
TOP3A-220ENST00000585031 LAMTOR5O43504 91 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 GAS2O43903 313 aaKnown RBP20.3■□□□□ 0.84
TOP3A-220ENST00000585031 PSMD10O75832 226 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 CD72P21854 359 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 OR1G1P47890 313 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 GLUD2P49448 558 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 DSG1Q02413 1049 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 XKR3Q5GH77 459 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 ANO5Q75V66 913 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 GLYCTKQ8IVS8 523 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 ZNF579Q8NAF0 562 aaKnown RBP20.3■□□□□ 0.84
TOP3A-220ENST00000585031 ATRIPQ8WXE1 791 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 FAM193BQ96PV7 902 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-220ENST00000585031 RIT2Q99578 217 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 PRKD2Q9BZL6 878 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 INO80BQ9C086 356 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-220ENST00000585031 CHST7Q9NS84 486 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 DPP7Q9UHL4 492 aa20.3■□□□□ 0.84
TOP3A-220ENST00000585031 KANSL1LA0AUZ9 987 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 GAS7O60861 476 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 RPL17P18621 184 aaKnown RBP20.29■□□□□ 0.84
TOP3A-220ENST00000585031 NTHL1P78549 312 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 CSTF1Q05048 431 aaKnown RBP20.29■□□□□ 0.84
TOP3A-220ENST00000585031 DSC1Q08554 894 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 LRCH2Q5VUJ6 765 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 PLA2G4FQ68DD2 849 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 HDAC7Q8WUI4 952 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 SECISBP2LQ93073 1101 aaKnown RBP20.29■□□□□ 0.84
TOP3A-220ENST00000585031 BCO2Q9BYV7 579 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 OSBPL6Q9BZF3 934 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 GPR62Q9BZJ7 368 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 PIDD1Q9HB75 910 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 PARD6AQ9NPB6 346 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 SPATA6Q9NWH7 488 aaPredicted RBP20.29■□□□□ 0.84
TOP3A-220ENST00000585031 ZSCAN32Q9NX65 697 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 KANSL3Q9P2N6 904 aa20.29■□□□□ 0.84
TOP3A-220ENST00000585031 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 DDX11L8A8MPP1 907 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 C1RP00736 705 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 SFNP31947 248 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 DNM2P50570 870 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 JAK3P52333 1124 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 ADCK5Q3MIX3 580 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 TEKT3Q9BXF9 490 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 PLEKHA4Q9H4M7 779 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 C6orf50Q9HD87 102 aa20.28■□□□□ 0.84
TOP3A-220ENST00000585031 SMG5Q9UPR3 1016 aaKnown RBP20.28■□□□□ 0.84
TOP3A-220ENST00000585031 TBC1D4O60343 1298 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.84
TOP3A-220ENST00000585031 NPEPPSP55786 919 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 ELMSAN1Q6PJG2 1045 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 TSSK4Q6SA08 328 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 MIER3Q7Z3K6 550 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 RABGGTAQ92696 567 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 ZFP42Q96MM3 310 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 GAD1Q99259 594 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 ESYT1Q9BSJ8 1104 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 EIF2AQ9BY44 585 aaKnown RBP20.27■□□□□ 0.84
TOP3A-220ENST00000585031 SSX2IPQ9Y2D8 614 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 HES2Q9Y543 173 aa20.27■□□□□ 0.84
TOP3A-220ENST00000585031 CNTNAP2Q9UHC6 1331 aa20.27■□□□□ 0.83
TOP3A-220ENST00000585031 ARL5CA6NH57 179 aa20.26■□□□□ 0.83
TOP3A-220ENST00000585031 FAM170BA6NMN3 283 aa20.26■□□□□ 0.83
TOP3A-220ENST00000585031 MLF2Q15773 248 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-220ENST00000585031 SLC44A4Q53GD3 710 aa20.26■□□□□ 0.83
TOP3A-220ENST00000585031 GRASPQ7Z6J2 395 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-220ENST00000585031 ZDHHC7Q9NXF8 308 aa20.26■□□□□ 0.83
TOP3A-220ENST00000585031 COL4A3BPQ9Y5P4 624 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms