RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 LRRC53A6NM62 1247 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 TFRCP02786 760 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 PAFAH1B1P43034 410 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 LMAN1P49257 510 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 SOX10P56693 466 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ATP6V0A4Q9HBG4 840 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 XPNPEP1Q9NQW7 623 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 FAM207AQ9NSI2 230 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 SRGAP2O75044 1071 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 LGALS2P05162 132 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 PLS3P13797 630 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 POLGP54098 1239 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 PLCB4Q15147 1175 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 TARBP2Q15633 366 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ZC2HC1CQ53FD0 456 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ZNF720Q7Z2F6 126 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 MCPH1Q8NEM0 835 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 EEF2KMTQ96G04 330 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 CEP89Q96ST8 783 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 OSBPL9Q96SU4 736 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 CRACR2AQ9BSW2 395 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 FAN1Q9Y2M0 1017 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
CDK5RAP3-236ENST00000584991 A6NNZ2 444 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ANXA13P27216 316 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 HOXD13P35453 343 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 SLC26A2P50443 739 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 PEX3P56589 373 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 KCNMA1Q12791 1236 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 EMC2Q15006 297 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 TUBB8Q3ZCM7 444 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ATP8B4Q8TF62 1192 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 AENQ8WTP8 325 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 TRIB2Q92519 343 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 KIFAP3Q92845 792 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 LENG1Q96BZ8 264 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 CAPZA3Q96KX2 299 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 DHX33Q9H6R0 707 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-236ENST00000584991 BTNL10A8MVZ5 291 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 K7ENM7 598 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 EIF3DO15371 548 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 PPFIA4O75335 1185 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 MMP3P08254 477 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 PLEKP08567 350 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ZNF286BP0CG31 522 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 CAPN2P17655 700 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 KCNA1Q09470 495 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 KNOP1Q1ED39 458 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 BMT2Q1RMZ1 405 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 CCDC40Q4G0X9 1142 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 EMBQ6PCB8 327 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 KSR1Q8IVT5 923 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 TRIM59Q8IWR1 403 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 SPATA4Q8NEY3 305 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 ERAP1Q9NZ08 941 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 AIPL1Q9NZN9 384 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 TRPC6Q9Y210 931 aa16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 BZW2Q9Y6E2 419 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-236ENST00000584991 CASP8AP2Q9UKL3 1982 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 PDE2AO00408 941 aaPredicted RBP16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 CES2O00748 559 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 SYF2O95926 243 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 NNTQ13423 1086 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 CCDC181Q5TID7 509 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 MFSD14CQ5VZR4 134 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 STXBP4Q6ZWJ1 553 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 TLK2Q86UE8 772 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 BSNDQ8WZ55 320 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 TFR2Q9UP52 801 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 PCDHB13Q9Y5F0 798 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 CAPN6Q9Y6Q1 641 aa16.27■□□□□ 0.19
CDK5RAP3-236ENST00000584991 PCNTO95613 3336 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 GRID2IPA4D2P6 1211 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 GPR25O00155 361 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 EPHB6O15197 1021 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 RFC5P40937 340 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 CFAP221Q4G0U5 840 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 TRPV1Q8NER1 839 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.26■□□□□ 0.194e-10■□□□□ 9.4
CDK5RAP3-236ENST00000584991 TMEM143Q96AN5 459 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 SELENOOQ9BVL4 669 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 POLR3FQ9H1D9 316 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-236ENST00000584991 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms