RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TNFRSF10AO00220 468 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 ACKR2O00590 384 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 HNRNPDLO14979 420 aaKnown RBP15.22■□□□□ 0.03
TRAF4-215ENST00000584944 TSPAN1O60635 241 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 KIF20AO95235 890 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 PTMSP20962 102 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 LIG4P49917 911 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 WDR5P61964 334 aaKnown RBP15.22■□□□□ 0.03
TRAF4-215ENST00000584944 COASYQ13057 564 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 CUL4BQ13620 913 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 FAM26FQ5R3K3 315 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 L1TD1Q5T7N2 865 aaKnown RBP15.22■□□□□ 0.03
TRAF4-215ENST00000584944 CNNM4Q6P4Q7 775 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 UNC13DQ70J99 1090 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 TMEM161BQ8NDZ6 487 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 PHOSPHO2Q8TCD6 241 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 DNAJC19Q96DA6 116 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 CPB2Q96IY4 423 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 YME1L1Q96TA2 773 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 RGS18Q9NS28 235 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 ARHGAP28Q9P2N2 729 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 REV3LO60673 3130 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 TRANK1O15050 2925 aa15.22■□□□□ 0.03
TRAF4-215ENST00000584944 PRRC2BQ5JSZ5 2229 aaKnown RBP15.21■□□□□ 0.03
TRAF4-215ENST00000584944 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-215ENST00000584944 ENPP3O14638 875 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 HOXA2O43364 376 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 RPN1P04843 607 aaKnown RBP15.21■□□□□ 0.03
TRAF4-215ENST00000584944 CA3P07451 260 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 MAPTP10636 758 aaKnown RBP15.21■□□□□ 0.03
TRAF4-215ENST00000584944 NMT1P30419 496 aaKnown RBP15.21■□□□□ 0.03
TRAF4-215ENST00000584944 NCKAP1LP55160 1127 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 MRPS5P82675 430 aaKnown RBP15.21■□□□□ 0.03
TRAF4-215ENST00000584944 FAM187BQ17R55 369 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 SLC27A1Q6PCB7 646 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 HVCN1Q96D96 273 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 PGBD4Q96DM1 585 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 ACCSQ96QU6 501 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 OSBPL7Q9BZF2 842 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 TMX1Q9H3N1 280 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 FZD8Q9H461 694 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 OLFML3Q9NRN5 406 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 ANKFY1Q9P2R3 1169 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 TBX20Q9UMR3 447 aa15.21■□□□□ 0.03
TRAF4-215ENST00000584944 B4GALT5O43286 388 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 TLL1O43897 1013 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 MBD3O95983 291 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 ARF4P18085 180 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-215ENST00000584944 POU3F3P20264 500 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-215ENST00000584944 CASP1P29466 404 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 SARSP49591 514 aaKnown RBP15.2■□□□□ 0.02
TRAF4-215ENST00000584944 PSMD2Q13200 908 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 SNW1Q13573 536 aaKnown RBP15.2■□□□□ 0.02
TRAF4-215ENST00000584944 ZNF568Q3ZCX4 644 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAF4-215ENST00000584944 ZNF720Q7Z2F6 126 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 NPAS4Q8IUM7 802 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
TRAF4-215ENST00000584944 GTPBP4Q9BZE4 634 aaKnown RBP15.2■□□□□ 0.02
TRAF4-215ENST00000584944 ADGRA3Q8IWK6 1321 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 CLDN3O15551 220 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 NPTXRO95502 500 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 HARSP12081 509 aaKnown RBP15.19■□□□□ 0.02
TRAF4-215ENST00000584944 DEFB103AP81534 67 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 PNOCQ13519 176 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 DCAF4L1Q3SXM0 396 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 ZC2HC1CQ53FD0 456 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-215ENST00000584944 HERC6Q8IVU3 1022 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 TARS2Q9BW92 718 aaKnown RBP15.19■□□□□ 0.02
TRAF4-215ENST00000584944 APOL6Q9BWW8 343 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 CCDC113Q9H0I3 377 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 TMEM206Q9H813 350 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 FAM105AQ9NUU6 356 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 TMEM161AQ9NX61 479 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 PCDHB2Q9Y5E7 798 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 XIRP2A4UGR9 3374 aa15.19■□□□□ 0.02
TRAF4-215ENST00000584944 A0A0U1RQF3 1178 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 A0A1B0GUA9 196 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 FRMD3A2A2Y4 597 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 EPOPA6NHQ4 379 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 RFXAPO00287 272 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 MGEA5O60502 916 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 TOM1L1O75674 476 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 ARHGEF15O94989 841 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 EOMESO95936 686 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 ITGA4P13612 1032 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-215ENST00000584944 YARSP54577 528 aaKnown RBP15.18■□□□□ 0.02
TRAF4-215ENST00000584944 GTF2BQ00403 316 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 TAP1Q03518 808 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 DPYDQ12882 1025 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 STIM1Q13586 685 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 CAMK4Q16566 473 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 KMT5BQ4FZB7 885 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 SLFN12LQ6IEE8 588 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 GLB1LQ6UWU2 654 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms