RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PCDHB4Q9Y5E5 795 aa11.13□□□□□ -0.63
RFFL-212ENST00000584655 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 PDXKO00764 312 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 HGSO14964 777 aaPredicted RBP11.12□□□□□ -0.63
RFFL-212ENST00000584655 MMEP08473 750 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 CFHP08603 1231 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 VAV2P52735 878 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 RABGGTBP53611 331 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 GALCP54803 685 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 TAF1CQ15572 869 aaPredicted RBP11.12□□□□□ -0.63
RFFL-212ENST00000584655 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 OR5B17Q8NGF7 314 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 ARHGEF26Q96DR7 871 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 MTMR12Q9C0I1 747 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 CCDC113Q9H0I3 377 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 XPNPEP1Q9NQW7 623 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 PLAGL2Q9UPG8 496 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 MRFAP1Q9Y605 127 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 SDK1Q7Z5N4 2213 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 TLDC2A0PJX2 215 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 PI4K2BG5E9Z4 385 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 TBX3O15119 743 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 H2AFZP0C0S5 128 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 KCNA2P16389 499 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 ADSSP30520 456 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 TRIM14Q14142 442 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 H2AFVQ71UI9 128 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 CRYGNQ8WXF5 182 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 RBAKQ9NYW8 714 aaPredicted RBP11.12□□□□□ -0.63
RFFL-212ENST00000584655 DMGDHQ9UI17 866 aaKnown RBP11.12□□□□□ -0.63
RFFL-212ENST00000584655 A0A087WZ62 844 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 TADA3O75528 432 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 DYNLT1P63172 113 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 PRUNE1Q86TP1 453 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 FDXACB1Q9BRP7 624 aaPredicted RBP11.12□□□□□ -0.63
RFFL-212ENST00000584655 SYNCQ9H7C4 482 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
RFFL-212ENST00000584655 VPS18Q9P253 973 aa11.12□□□□□ -0.63
RFFL-212ENST00000584655 AGO2Q9UKV8 859 aaKnown RBP11.12□□□□□ -0.63
RFFL-212ENST00000584655 ATP4AP20648 1035 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 KCNJ1P48048 391 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 ZCWPW2Q504Y3 356 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 SV2AQ7L0J3 742 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 TMEM117Q9H0C3 514 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 SUCLA2Q9P2R7 463 aaPredicted RBP11.11□□□□□ -0.63
RFFL-212ENST00000584655 KNL1Q8NG31 2342 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 ITGA4P13612 1032 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 GAP43P17677 238 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 MARCKSL1P49006 195 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 ERVK-9P63128 1117 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 TRPC3Q13507 836 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 ZNF568Q3ZCX4 644 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 ERGIC2Q96RQ1 377 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 COL24A1Q17RW2 1714 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 GOLGA6L9A6NEM1 432 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 EIF3JO75822 258 aaKnown RBP11.11□□□□□ -0.63
RFFL-212ENST00000584655 PGK1P00558 417 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 MYL3P08590 195 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 OSBPP22059 807 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 EEF1DP3Q658K8 133 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 LBX2Q6XYB7 198 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 C2orf69Q8N8R5 385 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 DNAJC7Q99615 494 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 C10orf88Q9H8K7 445 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 GBA2Q9HCG7 927 aaPredicted RBP11.11□□□□□ -0.63
RFFL-212ENST00000584655 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
RFFL-212ENST00000584655 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 CEP72Q9P209 647 aa11.11□□□□□ -0.63
RFFL-212ENST00000584655 SERPING1P05155 500 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 C6orf222P0C671 652 aaPredicted RBP11.1□□□□□ -0.63
RFFL-212ENST00000584655 INSRRP14616 1297 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 CDO1Q16878 200 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 ARMCX2Q7L311 632 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 ZNF653Q96CK0 615 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 LPIN3Q9BQK8 851 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 NAA15Q9BXJ9 866 aaKnown RBP11.1□□□□□ -0.63
RFFL-212ENST00000584655 TRIM6Q9C030 488 aaPredicted RBP11.1□□□□□ -0.63
RFFL-212ENST00000584655 PRDM4Q9UKN5 801 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 ARAP2Q8WZ64 1704 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 IGSF9BQ9UPX0 1349 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 GON4LQ3T8J9 2241 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 OATP04181 439 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 EDN1P05305 212 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 SUPT20HL2P0C7V6 817 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 MYBL2P10244 700 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 AKAP5P24588 427 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 PLCB3Q01970 1234 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 RPS6KA1Q15418 735 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 MTMR14Q8NCE2 650 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 DDX3XO00571 662 aaKnown RBP eCLIP11.1□□□□□ -0.633e-14■■■□□ 16.2
RFFL-212ENST00000584655 THAP12O43422 761 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 PIAS1O75925 651 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 CXCL8P10145 99 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 GLRA2P23416 452 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 CYP4A22Q5TCH4 519 aa11.1□□□□□ -0.63
RFFL-212ENST00000584655 TMEM161BQ8NDZ6 487 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms