RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 C2orf40Q9H1Z8 148 aa17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 ELAC1Q9H777 363 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 RC3H2Q9HBD1 1191 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 LARSQ9P2J5 1176 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 PIN4Q9Y237 131 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 PCDHA5Q9Y5H7 936 aa17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 LINC01553A4QN01 128 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 LRRIQ4A6NIV6 560 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 DGKIO75912 1065 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 ERLIN2O94905 339 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 ARHGEF15O94989 841 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 SMC2O95347 1197 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 PEX3P56589 373 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 MRPS5P82675 430 aaKnown RBP17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 MBTD1Q05BQ5 628 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 EHHADHQ08426 723 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 COASYQ13057 564 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 KCNB1Q14721 858 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 AAK1Q2M2I8 961 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 KMT5BQ4FZB7 885 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 NT5DC1Q5TFE4 455 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 MYCT1Q8N699 235 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 ARNTL2Q8WYA1 636 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 SMARCE1Q969G3 411 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 SYAP1Q96A49 352 aaPredicted RBP17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 ASB2Q96Q27 587 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 GSDMAQ96QA5 445 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 TMEM161AQ9NX61 479 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 KIAA1468Q9P260 1216 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 SEL1LQ9UBV2 794 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 LRFN2Q9ULH4 789 aa17.58■□□□□ 0.4
CSNK1D-223ENST00000584472 PRRC2BQ5JSZ5 2229 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 ADGRA3Q8IWK6 1321 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 A0A0U1RQF3 1178 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 EPOPA6NHQ4 379 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 INO80B-WBP1J3KQ70 363 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 LPXNO60711 386 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 SKIP12755 728 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 AXLP30530 894 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 NPTX2P47972 431 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 NCBP1Q09161 790 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 DMP1Q13316 513 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 HERC4Q5GLZ8 1057 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 RBM43Q6ZSC3 357 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 SFR1Q86XK3 245 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 ZBTB8OSQ8IWT0 167 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 ZNF689Q96CS4 500 aaPredicted RBP17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 CCDC51Q96ER9 411 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 FIZ1Q96SL8 496 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 NTPCRQ9BSD7 190 aaKnown RBP17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 OLFML3Q9NRN5 406 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 KCNG1Q9UIX4 513 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 COG5Q9UP83 839 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 PCDHB7Q9Y5E2 793 aa17.57■□□□□ 0.4
CSNK1D-223ENST00000584472 HOXA2O43364 376 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 TSPAN1O60635 241 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 EOMESO95936 686 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 MAPTP10636 758 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 HOXA11P31270 313 aaPredicted RBP17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 RAB27AP51159 221 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 EFNA5P52803 228 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 NCKAP1LP55160 1127 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 AMHR2Q16671 573 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 TWF2Q6IBS0 349 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 ECHDC2Q86YB7 292 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 FAM178BQ8IXR5 827 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 CMTR2Q8IYT2 770 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 DEPTORQ8TB45 409 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 HPS3Q969F9 1004 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 CCDC47Q96A33 483 aaKnown RBP17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 PRIMPOLQ96LW4 560 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 EXOC1Q9NV70 894 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 RMND1Q9NWS8 449 aa17.56■□□□□ 0.4
CSNK1D-223ENST00000584472 COL4A4P53420 1690 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 RALGAPA2Q2PPJ7 1873 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 CCDC169A6NNP5 214 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 ZNF623O75123 536 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 SMTNP53814 917 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 PSMD2Q13200 908 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 FAM187BQ17R55 369 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 FAM26FQ5R3K3 315 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 NOTUMQ6P988 496 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 ZNF598Q86UK7 904 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 RSPH1Q8WYR4 309 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 KIFC3Q9BVG8 833 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 FZD8Q9H461 694 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 MRPL44Q9H9J2 332 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 KMT5AQ9NQR1 393 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 PRMT7Q9NVM4 692 aaPredicted RBP17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 TBC1D7Q9P0N9 293 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 MAN1B1Q9UKM7 699 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 NCOR1O75376 2440 aa17.55■□□□□ 0.4
CSNK1D-223ENST00000584472 FNDC1Q4ZHG4 1894 aaPredicted RBP17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 PHLPP2Q6ZVD8 1323 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 CNTNAP2Q9UHC6 1331 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 SLC16A4O15374 487 aa17.54■□□□□ 0.4
CSNK1D-223ENST00000584472 NMT1P30419 496 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms