RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 TMEM175Q9BSA9 504 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 RWDD1Q9H446 243 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-205ENST00000582331 FAM105AQ9NUU6 356 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 SEPT9Q9UHD8 586 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-205ENST00000582331 FAN1Q9Y2M0 1017 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 SAMM50Q9Y512 469 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 PCDHGA2Q9Y5H1 932 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 SLC12A7Q9Y666 1083 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 ZFHX4Q86UP3 3567 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 OTOGLQ3ZCN5 2332 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 IGLV3-22A0A075B6J6 115 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 KANSL1LA0AUZ9 987 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 SMCO2A6NFE2 343 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 MEIS3P2A8K0S8 358 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 SH2B2O14492 632 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 NRP1O14786 923 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 TEX28O15482 410 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 B4GALT3O60512 393 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 DDHD2O94830 711 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 GLUD1P00367 558 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 SOD2P04179 222 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 OATP04181 439 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 ADRB1P08588 477 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 SFPQP23246 707 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 MCM5P33992 734 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 LIFRP42702 1097 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 RAB27AP51159 221 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 GPC5P78333 572 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 CSTF1Q05048 431 aaKnown RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 HTR4Q13639 388 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 PPP1R18Q6NYC8 613 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 GET4Q7L5D6 327 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 HDAC7Q8WUI4 952 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 PHKBQ93100 1093 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 ZNF707Q96C28 371 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 INO80BQ9C086 356 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 GLT8D2Q9H1C3 349 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 ZSCAN32Q9NX65 697 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 KANSL3Q9P2N6 904 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 USP18Q9UMW8 372 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 SMG5Q9UPR3 1016 aaKnown RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 PIN4Q9Y237 131 aaKnown RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 ZFP37Q9Y6Q3 630 aaPredicted RBP8.58□□□□□ -1.04
CCDC47-205ENST00000582331 NUMBLQ9Y6R0 609 aa8.58□□□□□ -1.04
CCDC47-205ENST00000582331 CEP250Q9BV73 2442 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 A0A087WZ62 844 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 FAM170BA6NMN3 283 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 WDR64B1ANS9 1081 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 GAS2O43903 313 aaKnown RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 ZNF862O60290 1169 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 TBC1D4O60343 1298 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 PAPLNO95428 1278 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 CYP3A4P08684 503 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 SPATA31D3P0C874 917 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 MAGEA9P43362 315 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 DNM2P50570 870 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 SETQ01105 290 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 PRKCQQ04759 706 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 UBXN2BQ14CS0 331 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 JAKMIP3Q5VZ66 844 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 SYNE3Q6ZMZ3 975 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 AGMOQ6ZNB7 445 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 SPATA31D4Q6ZUB0 917 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 TAS1R1Q7RTX1 841 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 PALB2Q86YC2 1186 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 ZBTB44Q8NCP5 570 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 ST13P5Q8NFI4 369 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 FDXACB1Q9BRP7 624 aaPredicted RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 RPP25Q9BUL9 199 aaKnown RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 DDX23Q9BUQ8 820 aaKnown RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 HERC2P3Q9BVR0 1158 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 OSBPL6Q9BZF3 934 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 NT5C3AQ9H0P0 336 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 EPC1Q9H2F5 836 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 PLEKHA4Q9H4M7 779 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 RXFP1Q9HBX9 757 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 ZDHHC7Q9NXF8 308 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 RBM19Q9Y4C8 960 aaKnown RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 PCDHB2Q9Y5E7 798 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 CFAP47Q6ZTR5 3102 aa8.57□□□□□ -1.04
CCDC47-205ENST00000582331 MYH9P35579 1960 aaKnown RBP8.57□□□□□ -1.04
CCDC47-205ENST00000582331 LILRB5O75023 590 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 C1RP00736 705 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 POMCP01189 267 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 TGM1P22735 817 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 FSHRP23945 695 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 GLUD2P49448 558 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 PRKCEQ02156 737 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 DRP2Q13474 957 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 TARBP2Q15633 366 aaKnown RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 MLF2Q15773 248 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 SLC44A4Q53GD3 710 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 RSPO2Q6UXX9 243 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 CATSPER4Q7RTX7 472 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 MRPL10Q7Z7H8 261 aaKnown RBP8.56□□□□□ -1.04
CCDC47-205ENST00000582331 ZNF410Q86VK4 478 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
CCDC47-205ENST00000582331 CRYGNQ8WXF5 182 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms