RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 AGPAT5Q9NUQ2 364 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 TYW1Q9NV66 732 aaKnown RBP10.45□□□□□ -0.74
RFFL-210ENST00000582308 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 DACH1Q9UI36 760 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 RWDD2AQ9UIY3 292 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 PADI3Q9ULW8 664 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 ST3GAL5Q9UNP4 418 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 EXOC7Q9UPT5 735 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 A0A1B0GUA9 196 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 ABLIM1O14639 778 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 GPR182O15218 404 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 CLIC2O15247 247 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 ERLIN2O94905 339 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 PROZP22891 400 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 AXLP30530 894 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 ZNF165P49910 485 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 LIG4P49917 911 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
RFFL-210ENST00000582308 PAK2Q13177 524 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 FOXR2Q6PJQ5 311 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 HS2ST1Q7LGA3 356 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 CDR2LQ86X02 465 aaPredicted RBP10.44□□□□□ -0.74
RFFL-210ENST00000582308 GAS2L3Q86XJ1 694 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 C7orf61Q8IZ16 206 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 ZSWIM2Q8NEG5 633 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 CBWD1Q9BRT8 395 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 PDZD7Q9H5P4 517 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 CBX8Q9HC52 389 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 DMAC2Q9NW81 257 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 CGNQ9P2M7 1197 aaKnown RBP10.44□□□□□ -0.74
RFFL-210ENST00000582308 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 TNFSF13BQ9Y275 285 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 STYXL1Q9Y6J8 313 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 TTC3P53804 2025 aa10.44□□□□□ -0.74
RFFL-210ENST00000582308 PDCD11Q14690 1871 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 A0A0B4J269 797 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 BICDL2A1A5D9 508 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 CALUO43852 315 aaPredicted RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 MGEA5O60502 916 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 TOM1L1O75674 476 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 PARNO95453 639 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 CXCL10P02778 98 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 NR3C1P04150 777 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 RAG1P15918 1043 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 SNRPFP62306 86 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 LRRC63Q05C16 580 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 NCBP1Q09161 790 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 DSC3Q14574 896 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 NCAPHQ15003 741 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 IQCB1Q15051 598 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 NFIL3Q16649 462 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 TCTN1Q2MV58 587 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 EDRF1Q3B7T1 1238 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 PLEKHG4Q58EX7 1191 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 NOTUMQ6P988 496 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 MPZL3Q6UWV2 235 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 ZBTB33Q86T24 672 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 SLC9A9Q8IVB4 645 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 DHX40Q8IX18 779 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 C12orf56Q8IXR9 622 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 ZC3H3Q8IXZ2 948 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 GOLGA5Q8TBA6 731 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 ENOX1Q8TC92 643 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 EEF2KMTQ96G04 330 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 TSG101Q99816 390 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 BPIFA3Q9BQP9 254 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 HTATIP2Q9BUP3 242 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 IFIH1Q9BYX4 1025 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 NAT10Q9H0A0 1025 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 PCIF1Q9H4Z3 704 aa10.43□□□□□ -0.74
RFFL-210ENST00000582308 PIN4Q9Y237 131 aaKnown RBP10.43□□□□□ -0.74
RFFL-210ENST00000582308 N4BP3O15049 544 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 CLDN3O15551 220 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 FAM189A1O60320 539 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 EVI5O60447 810 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 CAVIN2O95810 425 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 GARTP22102 1010 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 NR2F2P24468 414 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 CYP2J2P51589 502 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 FKBP3Q00688 224 aaKnown RBP10.42□□□□□ -0.74
RFFL-210ENST00000582308 MCL1Q07820 350 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 NOLC1Q14978 699 aaKnown RBP eCLIP10.42□□□□□ -0.74
RFFL-210ENST00000582308 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 ZNF568Q3ZCX4 644 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 UBXN11Q5T124 520 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 SPATA1Q5VX52 437 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 SLFN12LQ6IEE8 588 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 MFSD5Q6N075 450 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 ARMCX5Q6P1M9 558 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 LRRC55Q6ZSA7 311 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 DEFB128Q7Z7B8 93 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 RTN4RL1Q86UN2 441 aaPredicted RBP10.42□□□□□ -0.74
RFFL-210ENST00000582308 IRF2BP1Q8IU81 584 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 AOPEPQ8N6M6 819 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 DBF4BQ8NFT6 615 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 TMEM174Q8WUU8 243 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 LINC01599Q8WXQ3 324 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 POMGNT1Q8WZA1 660 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 TCHPQ9BT92 498 aa10.42□□□□□ -0.74
RFFL-210ENST00000582308 MSTO1Q9BUK6 570 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms