RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 TRIOO75962 3097 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 ARL5CA6NH57 179 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 LINC01565O15544 149 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 NCK2O43639 380 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 CSPG5O95196 566 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 PLA2G4BP0C869 781 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 ITGA4P13612 1032 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 KCNA5P22460 613 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 PPM1AP35813 382 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 NPTX2P47972 431 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 NCBP1Q09161 790 aaKnown RBP13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 KCNC3Q14003 757 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 PPP2R5AQ15172 486 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 NT5DC1Q5TFE4 455 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 CABP7Q86V35 215 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 ZBTB8OSQ8IWT0 167 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 USP28Q96RU2 1077 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 VN1R3Q9BXE9 311 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 PDZD7Q9H5P4 517 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 UBN1Q9NPG3 1134 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 INPP5FQ9Y2H2 1132 aa13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 SRPRBQ9Y5M8 271 aaKnown RBP13.68□□□□□ -0.22
SMARCD2-209ENST00000581832 SFI1A8K8P3 1242 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 NPTXRO95502 500 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 GLP2RO95838 553 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 EFEMP2O95967 443 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 PRKCBP05771 671 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 MARCKSP29966 332 aaPredicted RBP13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 SLC11A1P49279 550 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 ALDH7A1P49419 539 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 PEX3P56589 373 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 DSC1Q08554 894 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 ZRSR1Q15695 479 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 MAPK6Q16659 721 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 EEF1DP3Q658K8 133 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 PDE12Q6L8Q7 609 aaKnown RBP13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 EFHBQ8N7U6 833 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 ADAMTS19Q8TE59 1207 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 IGSF21Q96ID5 467 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 EPSTI1Q96J88 318 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 IFT74Q96LB3 600 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 ZFP42Q96MM3 310 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 GAD1Q99259 594 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 TIPINQ9BVW5 301 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 CXCL16Q9H2A7 254 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 TMEM134Q9H6X4 195 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 C17orf75Q9HAS0 396 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 CLDND1Q9NY35 253 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 KANSL3Q9P2N6 904 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
SMARCD2-209ENST00000581832 NPHP3-ACAD11A0A0J9YXS1 232 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 HIDE1A8MVS5 230 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 H3BQ06 376 aaPredicted RBP13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 ABLIM1O14639 778 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 TBX10O75333 385 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 POMCP01189 267 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 PLCG1P19174 1290 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 AKAP5P24588 427 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 MLH1P40692 756 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 UBA7P41226 1012 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 NRIP1P48552 1158 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 NASPP49321 788 aaPredicted RBP13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 EFNA5P52803 228 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 KRT17Q04695 432 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 PRPF4BQ13523 1007 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 SLC39A14Q15043 492 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 KARSQ15046 597 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 DUSP6Q16828 381 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 SPECC1Q5M775 1068 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 RBM23Q86U06 439 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 VN1R2Q8NFZ6 395 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 KCNN1Q92952 543 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 MSLNLQ96KJ4 702 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 CLIC6Q96NY7 704 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 NECAB3Q96P71 396 aaPredicted RBP13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 IGFLR1Q9H665 355 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 PTPRHQ9HD43 1115 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 KCND2Q9NZV8 630 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 CLEC1BQ9P126 229 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 PUF60Q9UHX1 559 aaKnown RBP13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 ZMYM2Q9UBW7 1377 aa13.66□□□□□ -0.22
SMARCD2-209ENST00000581832 CITO14578 2027 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 K7ERI5 159 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 NRP1O14786 923 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 N4BP3O15049 544 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 PER2O15055 1255 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 RNASELQ05823 741 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 HSCBQ8IWL3 235 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms