RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 SFPQP23246 707 aaKnown RBP eCLIP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 LTBRP36941 435 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 CCT6AP40227 531 aaKnown RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 MCM2P49736 904 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 PTENP60484 403 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 DLX2Q07687 328 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 CUL4AQ13619 759 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 CAPSQ13938 189 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 PDIA5Q14554 519 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 SRGAP1Q7Z6B7 1085 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 RBM23Q86U06 439 aaKnown RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 CDR2LQ86X02 465 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 NACC1Q96RE7 527 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 MMTAG2Q9BU76 263 aaKnown RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 TMEM117Q9H0C3 514 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 POLR3FQ9H1D9 316 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 NSUN3Q9H649 340 aaKnown RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 UBE2ZQ9H832 354 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 AGPAT5Q9NUQ2 364 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 FAM105AQ9NUU6 356 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 DACT1Q9NYF0 836 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 DBR1Q9UK59 544 aaKnown RBP10.78□□□□□ -0.68
TOP3A-211ENST00000581536 COG5Q9UP83 839 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 KIAA1024Q9UPX6 916 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 USP20Q9Y2K6 914 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 SLC27A5Q9Y2P5 690 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 RWDD3Q9Y3V2 267 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 PCDHB2Q9Y5E7 798 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 PCDHB12Q9Y5F1 795 aa10.78□□□□□ -0.68
TOP3A-211ENST00000581536 E9PMD0 336 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 H3BQ06 376 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 PER2O15055 1255 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 OFD1O75665 1012 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 FGF18O76093 207 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 KCNA5P22460 613 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 ORC2Q13416 577 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 MXD4Q14582 209 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 NAALADL2Q58DX5 795 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 AGMOQ6ZNB7 445 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 FAM43BQ6ZT52 329 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 MRPL10Q7Z7H8 261 aaKnown RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 IGSF22Q8N9C0 903 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 SMG8Q8ND04 991 aaKnown RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 ADAMTS19Q8TE59 1207 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 BSNDQ8WZ55 320 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 SYMPKQ92797 1274 aaKnown RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 PLIN2Q99541 437 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 EIF2AQ9BY44 585 aaKnown RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 DDX19AQ9NUU7 478 aaKnown RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 MIOSQ9NXC5 875 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 CLDND1Q9NY35 253 aa10.77□□□□□ -0.69
TOP3A-211ENST00000581536 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-211ENST00000581536 INO80B-WBP1J3KQ70 363 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 B4GALT5O43286 388 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 GAS2O43903 313 aaKnown RBP10.76□□□□□ -0.69
TOP3A-211ENST00000581536 B4GALT3O60512 393 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 TSPAN1O60635 241 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 ZNF623O75123 536 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 DDHD2O94830 711 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 BCAR1P56945 870 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 RBM10P98175 930 aaKnown RBP10.76□□□□□ -0.69
TOP3A-211ENST00000581536 MBTD1Q05BQ5 628 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 ADAM15Q13444 863 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 CLUL1Q15846 466 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 DTHD1Q6ZMT9 781 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 ZNF280BQ86YH2 543 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 THNSL1Q8IYQ7 743 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 ABI1Q8IZP0 508 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 IL27Q8NEV9 243 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 ERMNQ8TAM6 284 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 MICAL1Q8TDZ2 1067 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 CCDC43Q96MW1 224 aaKnown RBP10.76□□□□□ -0.69
TOP3A-211ENST00000581536 TRAIPQ9BWF2 469 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 LMAN2LQ9H0V9 348 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 BHMT2Q9H2M3 363 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 NRDE2Q9H7Z3 1164 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 DNAJB4Q9UDY4 337 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 INPP5FQ9Y2H2 1132 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 HES2Q9Y543 173 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 TRIOO75962 3097 aa10.76□□□□□ -0.69
TOP3A-211ENST00000581536 CUL9Q8IWT3 2517 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 ARHGEF35A5YM69 484 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 LRRIQ4A6NIV6 560 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 EDN1P05305 212 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 IL9P15248 144 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 ARF4P18085 180 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-211ENST00000581536 CYP11B2P19099 503 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 NRIP1P48552 1158 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 ATP2C1P98194 919 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-211ENST00000581536 GRIN1Q05586 938 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 POU5F1BQ06416 359 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 TFDP1Q14186 410 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 ZRSR1Q15695 479 aaKnown RBP10.75□□□□□ -0.69
TOP3A-211ENST00000581536 AAK1Q2M2I8 961 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 CTC1Q2NKJ3 1217 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 LEXMQ3ZCV2 418 aa10.75□□□□□ -0.69
TOP3A-211ENST00000581536 TIGD5Q53EQ6 642 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms