RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 FERMT3Q86UX7 667 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 SLFN12Q8IYM2 578 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
GGA3-210ENST00000580799 RNF149Q8NC42 400 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 HDAC7Q8WUI4 952 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 STAMQ92783 540 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 NKD2Q969F2 451 aaPredicted RBP11.47□□□□□ -0.57
GGA3-210ENST00000580799 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 PHF20Q9BVI0 1012 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 HERC2P3Q9BVR0 1158 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 ZSWIM4Q9H7M6 989 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 MAN1C1Q9NR34 630 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 WRAP73Q9P2S5 460 aaPredicted RBP11.47□□□□□ -0.57
GGA3-210ENST00000580799 FBXL21Q9UKT6 434 aa11.47□□□□□ -0.57
GGA3-210ENST00000580799 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 ARL5CA6NH57 179 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 C2CD2LO14523 706 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 MARCH6O60337 910 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 CCNT1O60563 726 aaKnown RBP11.46□□□□□ -0.57
GGA3-210ENST00000580799 BAG4O95429 457 aaKnown RBP11.46□□□□□ -0.57
GGA3-210ENST00000580799 EFEMP2O95967 443 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 GLUD1P00367 558 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 GLUD2P49448 558 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 DSC1Q08554 894 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 TFDP1Q14186 410 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 XKR9Q5GH70 373 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 CCDC105Q8IYK2 499 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 COLGALT2Q8IYK4 626 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 GPR65Q8IYL9 337 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 HACE1Q8IYU2 909 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 RNF168Q8IYW5 571 aaPredicted RBP11.46□□□□□ -0.57
GGA3-210ENST00000580799 SMG8Q8ND04 991 aaKnown RBP11.46□□□□□ -0.57
GGA3-210ENST00000580799 FLCNQ8NFG4 579 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 HAS1Q92839 578 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 NXPE3Q969Y0 559 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 MTRQ99707 1265 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 RXFP1Q9HBX9 757 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 WDR6Q9NNW5 1121 aaKnown RBP11.46□□□□□ -0.57
GGA3-210ENST00000580799 MARCH5Q9NX47 278 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 KCNJ14Q9UNX9 436 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 IPPQ9Y573 584 aa11.46□□□□□ -0.57
GGA3-210ENST00000580799 TDRD15B5MCY1 1934 aaKnown RBP11.46□□□□□ -0.58
GGA3-210ENST00000580799 ZMYM2Q9UBW7 1377 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 CLUHO75153 1309 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 CCDC195A0A1B0GUA6 201 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 TEX28O15482 410 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 TSPAN1O60635 241 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 PAPLNO95428 1278 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 NPR3P17342 541 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 GBP2P32456 591 aaPredicted RBP11.45□□□□□ -0.58
GGA3-210ENST00000580799 MLH1P40692 756 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 OR1G1P47890 313 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 PTENP60484 403 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 DSG1Q02413 1049 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 CREMQ03060 361 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 SPIRE1Q08AE8 756 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 STK3Q13188 491 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 KIAA0319Q5VV43 1072 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 FRMD5Q7Z6J6 570 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
GGA3-210ENST00000580799 SIX5Q8N196 739 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 FEZF2Q8TBJ5 459 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 DYDC2Q96IM9 177 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 COLEC11Q9BWP8 271 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 NFKBIZQ9BYH8 718 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 CSRNP2Q9H175 543 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 PLEKHA4Q9H4M7 779 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.45□□□□□ -0.58
GGA3-210ENST00000580799 CHST7Q9NS84 486 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 RGL1Q9NZL6 768 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 EPS15L1Q9UBC2 864 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 WNT16Q9UBV4 365 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 GIT1Q9Y2X7 761 aa11.45□□□□□ -0.58
GGA3-210ENST00000580799 PRG3Q9Y2Y8 225 aaPredicted RBP11.45□□□□□ -0.58
GGA3-210ENST00000580799 CFAP54Q96N23 3096 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 INO80B-WBP1J3KQ70 363 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 N4BP1O75113 896 aaKnown RBP11.44□□□□□ -0.58
GGA3-210ENST00000580799 LYPLA2O95372 231 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 NCAPH2Q6IBW4 605 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 PIK3AP1Q6ZUJ8 805 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 DTWD2Q8NBA8 298 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 SMG7Q92540 1137 aaKnown RBP11.44□□□□□ -0.58
GGA3-210ENST00000580799 GAD1Q99259 594 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 EIF2AQ9BY44 585 aaKnown RBP11.44□□□□□ -0.58
GGA3-210ENST00000580799 TRIM6Q9C030 488 aaPredicted RBP11.44□□□□□ -0.58
GGA3-210ENST00000580799 BMP2KQ9NSY1 1161 aaPredicted RBP11.44□□□□□ -0.58
GGA3-210ENST00000580799 ANKEF1Q9NU02 776 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 PDRG1Q9NUG6 133 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 ZDHHC7Q9NXF8 308 aa11.44□□□□□ -0.58
GGA3-210ENST00000580799 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
GGA3-210ENST00000580799 ZBTB39O15060 712 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 PI15O43692 258 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 DGAT1O75907 488 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 SLITRK3O94933 977 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 SCNN1GP51170 649 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 CYP4A11Q02928 519 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 MBTD1Q05BQ5 628 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 GRIK3Q13003 919 aa11.43□□□□□ -0.58
GGA3-210ENST00000580799 CTTNQ14247 550 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms