RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CACNA1HO95180 2353 aa14.89□□□□□ -0.03
TRAF4-214ENST00000580073 SOD2P04179 222 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 ITGA4P13612 1032 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 CLCN4P51793 760 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 CLCN5P51795 746 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 LAMTOR4Q0VGL1 99 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 LONRF3Q496Y0 759 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 NCAPH2Q6IBW4 605 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 TMC5Q6UXY8 1006 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 AGMOQ6ZNB7 445 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 MRPL10Q7Z7H8 261 aaKnown RBP14.88□□□□□ -0.03
TRAF4-214ENST00000580073 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 RNF149Q8NC42 400 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 CMASQ8NFW8 434 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-214ENST00000580073 RHOBTB2Q9BYZ6 727 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 IGSF9Q9P2J2 1179 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 KCNJ14Q9UNX9 436 aa14.88□□□□□ -0.03
TRAF4-214ENST00000580073 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 EML1O00423 815 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 GLUD1P00367 558 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 C1RP00736 705 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 SRGAP2CP0DJJ0 459 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 GLUD2P49448 558 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 FOSBP53539 338 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 NPEPPSP55786 919 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 TDGQ13569 410 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 XKR9Q5GH70 373 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 PIK3AP1Q6ZUJ8 805 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 C12orf76Q8N812 135 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-214ENST00000580073 PRPF31Q8WWY3 499 aaKnown RBP14.87□□□□□ -0.03
TRAF4-214ENST00000580073 TMEM143Q96AN5 459 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 KLHL5Q96PQ7 755 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 PHOX2BQ99453 314 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAF4-214ENST00000580073 FAM86C1Q9NVL1 165 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 DAXXQ9UER7 740 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-214ENST00000580073 LIMD1Q9UGP4 676 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 DUSP12Q9UNI6 340 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 MYH15Q9Y2K3 1946 aa14.87□□□□□ -0.03
TRAF4-214ENST00000580073 MEIS3P2A8K0S8 358 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 NRP1O14786 923 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 INPPL1O15357 1258 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 DGAT1O75907 488 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 SSBP05455 408 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRAF4-214ENST00000580073 ASGR2P07307 311 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 WEE2P0C1S8 567 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 RFX1P22670 979 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 KRT2P35908 639 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 POU5F1BQ06416 359 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 CUL4AQ13619 759 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 HDAC7Q8WUI4 952 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 BCL7CQ8WUZ0 217 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-214ENST00000580073 LLPHQ9BRT6 129 aaKnown RBP14.86□□□□□ -0.03
TRAF4-214ENST00000580073 MAN1C1Q9NR34 630 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 CDH22Q9UJ99 828 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 FBXL21Q9UKT6 434 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 IPPQ9Y573 584 aa14.86□□□□□ -0.03
TRAF4-214ENST00000580073 H0Y858 1186 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 INO80B-WBP1J3KQ70 363 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 PDGFBP01127 241 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-214ENST00000580073 POMCP01189 267 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 CNPP09543 421 aaKnown RBP14.85□□□□□ -0.03
TRAF4-214ENST00000580073 OR1G1P47890 313 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 MCM2P49736 904 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 PTENP60484 403 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 ZNF280BQ86YH2 543 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-214ENST00000580073 GPR65Q8IYL9 337 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 OXER1Q8TDS5 423 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 SNX21Q969T3 373 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 NXPE3Q969Y0 559 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 RPS6KC1Q96S38 1066 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 RTP3Q9BQQ7 232 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 COLEC11Q9BWP8 271 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 NFKBIZQ9BYH8 718 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 CSRNP2Q9H175 543 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 GIT1Q9Y2X7 761 aa14.85□□□□□ -0.03
TRAF4-214ENST00000580073 PRG3Q9Y2Y8 225 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-214ENST00000580073 TSPAN1O60635 241 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 DDHD2O94830 711 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 MLH1P40692 756 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 NBL1P41271 181 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 CYP4A11Q02928 519 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 GRIK3Q13003 919 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 TRIM29Q14134 588 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 EARS2Q5JPH6 523 aaKnown RBP14.84□□□□□ -0.03
TRAF4-214ENST00000580073 UBXN11Q5T124 520 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 COLGALT2Q8IYK4 626 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 TMEM105Q8N8V8 129 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 FLCNQ8NFG4 579 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 DYDC2Q96IM9 177 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 VN1R3Q9BXE9 311 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 PLEKHA4Q9H4M7 779 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 MINDY3Q9H8M7 445 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 BMP2KQ9NSY1 1161 aaPredicted RBP14.84□□□□□ -0.03
TRAF4-214ENST00000580073 ANKEF1Q9NU02 776 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 CLUHO75153 1309 aa14.84□□□□□ -0.03
TRAF4-214ENST00000580073 ARL5CA6NH57 179 aa14.83□□□□□ -0.04
TRAF4-214ENST00000580073 C2CD2LO14523 706 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms