RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 RIT2Q99578 217 aa11.22□□□□□ -0.61
SS18-210ENST00000578700 C7orf25Q9BPX7 421 aa11.22□□□□□ -0.61
SS18-210ENST00000578700 MXRA8Q9BRK3 442 aa11.22□□□□□ -0.61
SS18-210ENST00000578700 TEKT3Q9BXF9 490 aa11.22□□□□□ -0.61
SS18-210ENST00000578700 CELF4Q9BZC1 486 aaKnown RBP11.22□□□□□ -0.61
SS18-210ENST00000578700 AZI2Q9H6S1 392 aa11.22□□□□□ -0.61
SS18-210ENST00000578700 DNM3Q9UQ16 869 aa11.22□□□□□ -0.61
SS18-210ENST00000578700 IGLV3-22A0A075B6J6 115 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 MEIS1O00470 390 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 SERPINC1P01008 464 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 PDGFBP01127 241 aaPredicted RBP11.21□□□□□ -0.61
SS18-210ENST00000578700 SSBP05455 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
SS18-210ENST00000578700 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
SS18-210ENST00000578700 ITGB5P18084 799 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 CDC25BP30305 580 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 ZNF75DP51815 510 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 ERVFC1P60507 584 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 MTMR1Q13613 665 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 TMEM119Q4V9L6 283 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 HYIQ5T013 277 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 FAM102BQ5T8I3 360 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 PLPP4Q5VZY2 271 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
SS18-210ENST00000578700 SLC5A5Q92911 643 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 GPRASP2Q96D09 838 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 ASIC4Q96FT7 647 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 MRFAP1L1Q96HT8 127 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 PPP1R16BQ96T49 567 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 MMTAG2Q9BU76 263 aaKnown RBP11.21□□□□□ -0.61
SS18-210ENST00000578700 TRIM9Q9C026 710 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 AAASQ9NRG9 546 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 TBC1D22BQ9NU19 505 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 HCSTQ9UBK5 93 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 KIAA1024Q9UPX6 916 aa11.21□□□□□ -0.61
SS18-210ENST00000578700 FRYLO94915 3013 aa11.21□□□□□ -0.62
SS18-210ENST00000578700 FNDC1Q4ZHG4 1894 aaPredicted RBP11.21□□□□□ -0.62
SS18-210ENST00000578700 DCHS1Q96JQ0 3298 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 MYO10Q9HD67 2058 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PVALEFA0A1B0GWK0 134 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 DENND3A2RUS2 1198 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
SS18-210ENST00000578700 PSMA7O14818 248 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 MAFGO15525 162 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 FGF18O76093 207 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 RHOBTB3O94955 611 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 KIF20AO95235 890 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 MUTP22033 750 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 RPA1P27694 616 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 CA8P35219 290 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 KRT76Q01546 638 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PSMD2Q13200 908 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PPP2R5CQ13362 524 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PLCB4Q15147 1175 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PTPN21Q16825 1174 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 DUSP6Q16828 381 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 VN1R2Q8NFZ6 395 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 LENG9Q96B70 501 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PNMA5Q96PV4 448 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PCYT2Q99447 389 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 ADAM2Q99965 735 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
SS18-210ENST00000578700 IRF2BPLQ9H1B7 796 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 TUFT1Q9NNX1 390 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 TYW1Q9NV66 732 aaKnown RBP11.2□□□□□ -0.62
SS18-210ENST00000578700 SLC9A2Q9UBY0 812 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 PCDHA2Q9Y5H9 948 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 FAM186AA6NE01 2351 aa11.2□□□□□ -0.62
SS18-210ENST00000578700 ZNF292O60281 2723 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 IGSF9BQ9UPX0 1349 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 BICDL2A1A5D9 508 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 MGEA5O60502 916 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
SS18-210ENST00000578700 SRGAP2BP0DMP2 458 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 FGFR1P11362 822 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 ATF7P17544 494 aaPredicted RBP11.19□□□□□ -0.62
SS18-210ENST00000578700 BMP6P22004 513 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 MSNP26038 577 aaKnown RBP11.19□□□□□ -0.62
SS18-210ENST00000578700 KLRC1P26715 233 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 CASP1P29466 404 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 STAT5BP51692 787 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 UBE3AQ05086 875 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 SPAG1Q07617 926 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 PAK1Q13153 545 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 MCM6Q14566 821 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 KMT5BQ4FZB7 885 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 SPATA1Q5VX52 437 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 UNC13DQ70J99 1090 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
SS18-210ENST00000578700 CCDC65Q8IXS2 484 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 COLGALT1Q8NBJ5 622 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 CYP2W1Q8TAV3 490 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 SUSD6Q92537 303 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 GJA10Q969M2 543 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 RIPOR3Q96MK2 946 aa11.19□□□□□ -0.62
SS18-210ENST00000578700 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms