RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 ALCAMQ13740 583 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 UBXN11Q5T124 520 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 NT5DC1Q5TFE4 455 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 GLB1LQ6UWU2 654 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 ZPBP2Q6X784 338 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 UNC13DQ70J99 1090 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
ERBB2-208ENST00000578630 SFR1Q86XK3 245 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 CCDC47Q96A33 483 aaKnown RBP12.66□□□□□ -0.38
ERBB2-208ENST00000578630 BICD1Q96G01 975 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 SAMD11Q96NU1 681 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 ACO2Q99798 780 aaKnown RBP12.66□□□□□ -0.38
ERBB2-208ENST00000578630 TMEM117Q9H0C3 514 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 ST6GALNAC4Q9H4F1 302 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 KANSL3Q9P2N6 904 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
ERBB2-208ENST00000578630 TBX20Q9UMR3 447 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 TNFSF13BQ9Y275 285 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 RWDD3Q9Y3V2 267 aa12.66□□□□□ -0.38
ERBB2-208ENST00000578630 FRMD3A2A2Y4 597 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 TOM1L1O75674 476 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 NPTXRO95502 500 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 TAP1Q03518 808 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 DCAF4L1Q3SXM0 396 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 KRBA2Q6ZNG9 492 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 CDR2LQ86X02 465 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 HVCN1Q96D96 273 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 GBP4Q96PP9 640 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 TGS1Q96RS0 853 aaKnown RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 TARS2Q9BW92 718 aaKnown RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 MRPL9Q9BYD2 267 aaKnown RBP12.65□□□□□ -0.38
ERBB2-208ENST00000578630 BLZF1Q9H2G9 400 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 PDZD7Q9H5P4 517 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 AAASQ9NRG9 546 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 OLFML3Q9NRN5 406 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 IPPQ9Y573 584 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 MICAL3Q7RTP6 2002 aa12.65□□□□□ -0.38
ERBB2-208ENST00000578630 LCHNA4D1U4 455 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 LINC01553A4QN01 128 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 CLDN3O15551 220 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 GTPBP6O43824 516 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-208ENST00000578630 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
ERBB2-208ENST00000578630 OFD1O75665 1012 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 GCNT3O95395 438 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 FGFR1P11362 822 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 LIG4P49917 911 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 ERVK-21P61565 698 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 UBE2HP62256 183 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 FAM160A1Q05DH4 1040 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 COASYQ13057 564 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 PSMD2Q13200 908 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 CUL4BQ13620 913 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 PAN2Q504Q3 1202 aaKnown RBP12.64□□□□□ -0.39
ERBB2-208ENST00000578630 SLFN12LQ6IEE8 588 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 TAS1R3Q7RTX0 852 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 SYCP3Q8IZU3 236 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-208ENST00000578630 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 TMEM87AQ8NBN3 555 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 SMG8Q8ND04 991 aaKnown RBP12.64□□□□□ -0.39
ERBB2-208ENST00000578630 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 LPPQ93052 612 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 TIGD1Q96MW7 591 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 CASD1Q96PB1 797 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 FAM193BQ96PV7 902 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-208ENST00000578630 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 FIZ1Q96SL8 496 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 TMEM206Q9H813 350 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 RSAD1Q9HA92 442 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 PARP2Q9UGN5 583 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 USP20Q9Y2K6 914 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 GIT1Q9Y2X7 761 aa12.64□□□□□ -0.39
ERBB2-208ENST00000578630 SIP14410 1827 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 RB1P06400 928 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 MCF2P10911 925 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 ATF7P17544 494 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-208ENST00000578630 BMPR1AP36894 532 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 RNASELQ05823 741 aaKnown RBP12.63□□□□□ -0.39
ERBB2-208ENST00000578630 POSTNQ15063 836 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 ZC2HC1CQ53FD0 456 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-208ENST00000578630 NOMO2Q5JPE7 1267 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 EEF1DP3Q658K8 133 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 MPZL3Q6UWV2 235 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 AGMOQ6ZNB7 445 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 ZBTB33Q86T24 672 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 TMEM192Q8IY95 271 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
ERBB2-208ENST00000578630 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms