RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 MARK3P27448 753 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 ADORA2AP29274 412 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 ARHGAP44Q17R89 818 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 KRT39Q6A163 491 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 ALKBH5Q6P6C2 394 aaKnown RBP30.03■■■□□ 2.4
LIMD2-203ENST00000578067 FBXO38Q6PIJ6 1188 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 ABRAQ8N0Z2 381 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 GPR161Q8N6U8 529 aaKnown RBP30.03■■■□□ 2.4
LIMD2-203ENST00000578067 ATP8B4Q8TF62 1192 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 PACSIN1Q9BY11 444 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 PDCL3Q9H2J4 239 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 TMEM8AQ9HCN3 771 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 NENFQ9UMX5 172 aa30.03■■■□□ 2.4
LIMD2-203ENST00000578067 STRNO43815 780 aa30.02■■■□□ 2.4
LIMD2-203ENST00000578067 GTF2H1P32780 548 aa30.02■■■□□ 2.4
LIMD2-203ENST00000578067 SPRYD7Q5W111 196 aa30.02■■■□□ 2.4
LIMD2-203ENST00000578067 TRIM50Q86XT4 487 aa30.02■■■□□ 2.4
LIMD2-203ENST00000578067 ARHGEF19Q8IW93 802 aa30.02■■■□□ 2.4
LIMD2-203ENST00000578067 FAM213AQ9BRX8 229 aa30.02■■■□□ 2.4
LIMD2-203ENST00000578067 TMEM134Q9H6X4 195 aa30.02■■■□□ 2.4
LIMD2-203ENST00000578067 CTAGE15A4D2H0 777 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 KIAA0391O15091 583 aaKnown RBP30.01■■■□□ 2.4
LIMD2-203ENST00000578067 BUB1O43683 1085 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 EXTL3O43909 919 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 CTAGE8P0CG41 777 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 KLRC1P26715 233 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 NAP1L1P55209 391 aaKnown RBP30.01■■■□□ 2.4
LIMD2-203ENST00000578067 MAP2K1Q02750 393 aaPredicted RBP30.01■■■□□ 2.4
LIMD2-203ENST00000578067 CTAGE6Q86UF2 777 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 CTAGE4Q8IX94 777 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 EXOC8Q8IYI6 725 aa30.01■■■□□ 2.4
LIMD2-203ENST00000578067 ZNF233A6NK53 670 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 BTNL10A8MVZ5 291 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 ZBTB48P10074 688 aaPredicted RBP30.01■■■□□ 2.39
LIMD2-203ENST00000578067 H2AFXP16104 143 aaPredicted RBP30.01■■■□□ 2.39
LIMD2-203ENST00000578067 SLC26A2P50443 739 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 CAPSQ13938 189 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 PLCB4Q15147 1175 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 IER5Q5VY09 327 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 POP1Q99575 1024 aaKnown RBP30.01■■■□□ 2.39
LIMD2-203ENST00000578067 SMARCAD1Q9H4L7 1026 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 COQ4Q9Y3A0 265 aa30.01■■■□□ 2.39
LIMD2-203ENST00000578067 ATP8B3O60423 1300 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 TULP1O00294 542 aaPredicted RBP30■■■□□ 2.39
LIMD2-203ENST00000578067 FOXN3O00409 490 aaPredicted RBP30■■■□□ 2.39
LIMD2-203ENST00000578067 DDX3XO00571 662 aaKnown RBP eCLIP30■■■□□ 2.39
LIMD2-203ENST00000578067 LRRN2O75325 713 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 TMEM63BQ5T3F8 832 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 SLFN12LQ6IEE8 588 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 IVNS1ABPQ9Y6Y0 642 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 GAS2O43903 313 aaKnown RBP30■■■□□ 2.39
LIMD2-203ENST00000578067 ADCY3O60266 1144 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 SRGAP2O75044 1071 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 HSP90AA2PQ14568 343 aaPredicted RBP30■■■□□ 2.39
LIMD2-203ENST00000578067 TCP11Q8WWU5 503 aa30■■■□□ 2.39
LIMD2-203ENST00000578067 PRPF31Q8WWY3 499 aaKnown RBP30■■■□□ 2.39
LIMD2-203ENST00000578067 MCM3APO60318 1980 aa29.99■■■□□ 2.39
LIMD2-203ENST00000578067 DRP2Q13474 957 aa29.99■■■□□ 2.39
LIMD2-203ENST00000578067 KIF22Q14807 665 aa29.99■■■□□ 2.39
LIMD2-203ENST00000578067 SLC30A5Q8TAD4 765 aa29.99■■■□□ 2.39
LIMD2-203ENST00000578067 VTA1Q9NP79 307 aa29.99■■■□□ 2.39
LIMD2-203ENST00000578067 SNX12Q9UMY4 172 aa29.99■■■□□ 2.39
LIMD2-203ENST00000578067 ZBTB42B2RXF5 422 aa29.98■■■□□ 2.39
LIMD2-203ENST00000578067 PRLRP16471 622 aa29.98■■■□□ 2.39
LIMD2-203ENST00000578067 PSPC1Q8WXF1 523 aaKnown RBP29.98■■■□□ 2.39
LIMD2-203ENST00000578067 SYT11Q9BT88 431 aa29.98■■■□□ 2.39
LIMD2-203ENST00000578067 AGO2Q9UKV8 859 aaKnown RBP29.98■■■□□ 2.39
LIMD2-203ENST00000578067 SIP14410 1827 aa29.98■■■□□ 2.39
LIMD2-203ENST00000578067 TAPT1Q6NXT6 567 aa29.98■■■□□ 2.39
LIMD2-203ENST00000578067 ZNF467Q7Z7K2 595 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-203ENST00000578067 LNX1Q8TBB1 728 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-203ENST00000578067 SEMA4DQ92854 862 aa29.98■■■□□ 2.39
LIMD2-203ENST00000578067 PARK7Q99497 189 aaKnown RBP29.98■■■□□ 2.39
LIMD2-203ENST00000578067 TOPORSQ9NS56 1045 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-203ENST00000578067 IGKV6-21A0A0C4DH24 114 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 DLATP10515 647 aaKnown RBP29.97■■■□□ 2.39
LIMD2-203ENST00000578067 GPC3P51654 580 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 FBXL13Q8NEE6 735 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 OLIG1Q8TAK6 271 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 U2AF1L4Q8WU68 220 aaKnown RBP29.97■■■□□ 2.39
LIMD2-203ENST00000578067 TARS2Q9BW92 718 aaKnown RBP29.97■■■□□ 2.39
LIMD2-203ENST00000578067 EPC1Q9H2F5 836 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 SUGCTQ9HAC7 445 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 INTUQ9ULD6 942 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 PLXNB2O15031 1838 aa29.97■■■□□ 2.39
LIMD2-203ENST00000578067 CKAP4Q07065 602 aaKnown RBP29.96■■■□□ 2.39
LIMD2-203ENST00000578067 ARHGAP1Q07960 439 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 LAMC2Q13753 1193 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 ILDR2Q71H61 639 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 JPH2Q9BR39 696 aaPredicted RBP29.96■■■□□ 2.39
LIMD2-203ENST00000578067 ZSCAN20P17040 1043 aaPredicted RBP29.96■■■□□ 2.39
LIMD2-203ENST00000578067 EFNA5P52803 228 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 MKRN4PQ13434 485 aaPredicted RBP29.96■■■□□ 2.39
LIMD2-203ENST00000578067 MXD4Q14582 209 aaPredicted RBP29.96■■■□□ 2.39
LIMD2-203ENST00000578067 PSMD6Q15008 389 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 SV2AQ7L0J3 742 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 PTPN18Q99952 460 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 ARGLU1Q9NWB6 273 aaPredicted RBP29.96■■■□□ 2.39
LIMD2-203ENST00000578067 RAB20Q9NX57 234 aa29.96■■■□□ 2.39
LIMD2-203ENST00000578067 TRPC6Q9Y210 931 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms