RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 LAG3P18627 525 aa21.28■■□□□ 1
SS18-208ENST00000577751 LIG1P18858 919 aa21.28■■□□□ 1
SS18-208ENST00000577751 NOMO2Q5JPE7 1267 aa21.28■■□□□ 1
SS18-208ENST00000577751 NT5DC1Q5TFE4 455 aa21.28■■□□□ 1
SS18-208ENST00000577751 KLHL23Q8NBE8 558 aa21.28■■□□□ 1
SS18-208ENST00000577751 COLGALT1Q8NBJ5 622 aa21.28■■□□□ 1
SS18-208ENST00000577751 TMEM161BQ8NDZ6 487 aa21.28■■□□□ 1
SS18-208ENST00000577751 MRPL38Q96DV4 380 aaKnown RBP21.28■■□□□ 1
SS18-208ENST00000577751 PANK2Q9BZ23 570 aa21.28■■□□□ 1
SS18-208ENST00000577751 TRIM6Q9C030 488 aaPredicted RBP21.28■■□□□ 1
SS18-208ENST00000577751 RSAD1Q9HA92 442 aa21.28■■□□□ 1
SS18-208ENST00000577751 UBN1Q9NPG3 1134 aa21.28■■□□□ 1
SS18-208ENST00000577751 AAASQ9NRG9 546 aa21.28■■□□□ 1
SS18-208ENST00000577751 HES2Q9Y543 173 aa21.28■■□□□ 1
SS18-208ENST00000577751 PCDHB12Q9Y5F1 795 aa21.28■■□□□ 1
SS18-208ENST00000577751 PLXNA4Q9HCM2 1894 aa21.28■■□□□ 1
SS18-208ENST00000577751 ATG2AQ2TAZ0 1938 aa21.27■■□□□ 1
SS18-208ENST00000577751 GRM6O15303 877 aa21.27■■□□□ 1
SS18-208ENST00000577751 INPPL1O15357 1258 aa21.27■■□□□ 1
SS18-208ENST00000577751 NPTXRO95502 500 aa21.27■■□□□ 1
SS18-208ENST00000577751 ITGB1P05556 798 aa21.27■■□□□ 1
SS18-208ENST00000577751 STAT6P42226 847 aa21.27■■□□□ 1
SS18-208ENST00000577751 SMTNP53814 917 aa21.27■■□□□ 1
SS18-208ENST00000577751 NCKAP1LP55160 1127 aa21.27■■□□□ 1
SS18-208ENST00000577751 SPOUT1Q5T280 376 aaKnown RBP21.27■■□□□ 1
SS18-208ENST00000577751 SV2BQ7L1I2 683 aa21.27■■□□□ 1
SS18-208ENST00000577751 SPPL3Q8TCT6 385 aa21.27■■□□□ 1
SS18-208ENST00000577751 LMAN2LQ9H0V9 348 aa21.27■■□□□ 1
SS18-208ENST00000577751 NXF3Q9H4D5 531 aaKnown RBP21.27■■□□□ 1
SS18-208ENST00000577751 PARVGQ9HBI0 331 aa21.27■■□□□ 1
SS18-208ENST00000577751 TBC1D13Q9NVG8 400 aa21.27■■□□□ 1
SS18-208ENST00000577751 ATP6V1DQ9Y5K8 247 aa21.27■■□□□ 1
SS18-208ENST00000577751 MAPTP10636 758 aaKnown RBP21.26■□□□□ 0.99
SS18-208ENST00000577751 ME1P48163 572 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 AFF1P51825 1210 aaKnown RBP21.26■□□□□ 0.99
SS18-208ENST00000577751 KRT85P78386 507 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 E2F4Q16254 413 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 PTPROQ16827 1216 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 CSPP1Q1MSJ5 1256 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 EEF1DP3Q658K8 133 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 KCNT2Q6UVM3 1135 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 PDILTQ8N807 584 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 CHAMP1Q96JM3 812 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 FIZ1Q96SL8 496 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 ACO2Q99798 780 aaKnown RBP21.26■□□□□ 0.99
SS18-208ENST00000577751 ALG13Q9NP73 1137 aaKnown RBP21.26■□□□□ 0.99
SS18-208ENST00000577751 TNFSF13BQ9Y275 285 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 GIT1Q9Y2X7 761 aa21.26■□□□□ 0.99
SS18-208ENST00000577751 MYMKA6NI61 221 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 FAM13AO94988 1023 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 KRT18P05783 430 aaKnown RBP21.25■□□□□ 0.99
SS18-208ENST00000577751 DNAJB1P25685 340 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 CAMK1Q14012 370 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 CCDC85BQ15834 202 aaPredicted RBP21.25■□□□□ 0.99
SS18-208ENST00000577751 ATF7IP2Q5U623 682 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 RESP18Q5W5W9 173 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 HACE1Q8IYU2 909 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 MYCT1Q8N699 235 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 LEO1Q8WVC0 666 aaPredicted RBP21.25■□□□□ 0.99
SS18-208ENST00000577751 DDX12PQ92771 950 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 DNAJC19Q96DA6 116 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 ZNF558Q96NG5 402 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 ADPGKQ9BRR6 497 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 MRPL4Q9BYD3 311 aaKnown RBP21.25■□□□□ 0.99
SS18-208ENST00000577751 NRDE2Q9H7Z3 1164 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 PTPRHQ9HD43 1115 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 KANSL3Q9P2N6 904 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 INPP5FQ9Y2H2 1132 aa21.25■□□□□ 0.99
SS18-208ENST00000577751 ZMYM2Q9UBW7 1377 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 ARL5CA6NH57 179 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 H0YCG3 227 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 TRAK2O60296 914 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 FGF18O76093 207 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 SCP2P22307 547 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 NUCB2P80303 420 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 PLCB3Q01970 1234 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 TMEM132AQ24JP5 1023 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 DYMQ7RTS9 669 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 HAUS6Q7Z4H7 955 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 GSTCDQ8NEC7 633 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 URGCPQ8TCY9 931 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 PPM1EQ8WY54 764 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 GAD1Q99259 594 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 CUEDC2Q9H467 287 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 KBTBD4Q9NVX7 518 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 MIOSQ9NXC5 875 aa21.24■□□□□ 0.99
SS18-208ENST00000577751 TDRD15B5MCY1 1934 aaKnown RBP21.23■□□□□ 0.99
SS18-208ENST00000577751 ABLIM1O14639 778 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 PROZP22891 400 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 AKAP5P24588 427 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 BCAR1P56945 870 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 UBE3AQ05086 875 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 STRN3Q13033 797 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 DCAF4L1Q3SXM0 396 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 ZNF280BQ86YH2 543 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 MICALL1Q8N3F8 863 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 IQUBQ8NA54 791 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 POF1BQ8WVV4 589 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 SPATA32Q96LK8 384 aa21.23■□□□□ 0.99
SS18-208ENST00000577751 TARS2Q9BW92 718 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms