RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 CPB2Q96IY4 423 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-205ENST00000575815 HEXIM2Q96MH2 286 aaKnown RBP9.03□□□□□ -0.96
NCBP3-205ENST00000575815 HYOU1Q9Y4L1 999 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 ABCD1P33897 745 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 CPT1AP50416 773 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 ARPP19P56211 112 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 DNAJB3Q8WWF6 145 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 PKNOX2Q96KN3 472 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 CAPNS2Q96L46 248 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 GDAP1L1Q96MZ0 367 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 VTA1Q9NP79 307 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 OLFML3Q9NRN5 406 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 CAPN11Q9UMQ6 739 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 BZW2Q9Y6E2 419 aaKnown RBP9.03□□□□□ -0.96
NCBP3-205ENST00000575815 KCNA2P16389 499 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 HTRA3P83110 453 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 CCZ1BP86790 482 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 CCZ1P86791 482 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-205ENST00000575815 SP3Q02447 781 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 ELF2Q15723 593 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 SH3D19Q5HYK7 790 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 RAD9BQ6WBX8 426 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 GSTA5Q7RTV2 222 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 TRIM58Q8NG06 486 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 GOLGA1Q92805 767 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 FAM149B1Q96BN6 582 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 ACAP3Q96P50 834 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 WRAP73Q9P2S5 460 aaPredicted RBP9.03□□□□□ -0.96
NCBP3-205ENST00000575815 DBR1Q9UK59 544 aaKnown RBP9.03□□□□□ -0.96
NCBP3-205ENST00000575815 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
NCBP3-205ENST00000575815 SLC26A4O43511 780 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 AOC2O75106 756 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 FARP2O94887 1054 aaPredicted RBP9.02□□□□□ -0.96
NCBP3-205ENST00000575815 ALDH1A1P00352 501 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 TUBB4AP04350 444 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 ZBTB48P10074 688 aaPredicted RBP9.02□□□□□ -0.96
NCBP3-205ENST00000575815 THPOP40225 353 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 ERCC6LQ2NKX8 1250 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 ZNF354CQ86Y25 554 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 DNAAF5Q86Y56 855 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 TRIM10Q9UDY6 481 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 CHORDC1Q9UHD1 332 aaPredicted RBP9.02□□□□□ -0.96
NCBP3-205ENST00000575815 AGAP1Q9UPQ3 857 aa9.02□□□□□ -0.96
NCBP3-205ENST00000575815 WEE2P0C1S8 567 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 ATF7P17544 494 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-205ENST00000575815 BPIFB4P59827 614 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 YWHAEP62258 255 aaKnown RBP9.02□□□□□ -0.97
NCBP3-205ENST00000575815 MRPS25P82663 173 aaKnown RBP9.02□□□□□ -0.97
NCBP3-205ENST00000575815 SP2Q02086 613 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 GRIK4Q16099 956 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 E4F1Q66K89 784 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-205ENST00000575815 CCDC170Q8IYT3 715 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 RNF34Q969K3 372 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 AMFRQ9UKV5 643 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 LRFN2Q9ULH4 789 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 FRMPD4Q14CM0 1322 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 ANKRD63C9JTQ0 380 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 MYO1FO00160 1098 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 XPOTO43592 962 aaKnown RBP9.02□□□□□ -0.97
NCBP3-205ENST00000575815 MUTP22033 750 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 NAMPTP43490 491 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 MYO1EQ12965 1108 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 CRHR2Q13324 411 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 MKRN4PQ13434 485 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-205ENST00000575815 NCOA4Q13772 614 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 FAM117BQ6P1L5 589 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 ANKRD23Q86SG2 305 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 TEX2Q8IWB9 1127 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 ASAP3Q8TDY4 903 aa9.02□□□□□ -0.97
NCBP3-205ENST00000575815 COL5A3P25940 1745 aaPredicted RBP9.02□□□□□ -0.97
NCBP3-205ENST00000575815 RPS6KA5O75582 802 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 ZNF507Q8TCN5 953 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 IPO4Q8TEX9 1081 aaKnown RBP9.01□□□□□ -0.97
NCBP3-205ENST00000575815 CCDC114Q96M63 670 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 KATNAL1Q9BW62 490 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 SNX25Q9H3E2 840 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 RNPEPQ9H4A4 650 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 C17orf75Q9HAS0 396 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 PRDM5Q9NQX1 630 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-205ENST00000575815 RAB20Q9NX57 234 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 SLC15A5A6NIM6 579 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 ZBTB22O15209 634 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 SURF1Q15526 300 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 CCL14Q16627 93 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 FSCN1Q16658 493 aaKnown RBP9.01□□□□□ -0.97
NCBP3-205ENST00000575815 PDXDC1Q6P996 788 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 DSTYKQ6XUX3 929 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 RPUSD2Q8IZ73 545 aaKnown RBP9.01□□□□□ -0.97
NCBP3-205ENST00000575815 SLC30A5Q8TAD4 765 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-205ENST00000575815 XPNPEP3Q9NQH7 507 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 PRMT7Q9NVM4 692 aaPredicted RBP9.01□□□□□ -0.97
NCBP3-205ENST00000575815 SNX9Q9Y5X1 595 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 ASAP2O43150 1006 aa9.01□□□□□ -0.97
NCBP3-205ENST00000575815 SRGAP2O75044 1071 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms