RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SYT15Q9BQS2 421 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 NT5C3AQ9H0P0 336 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 ZMYND8Q9ULU4 1186 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-212ENST00000574799 ATRNL1Q5VV63 1379 aa10.27□□□□□ -0.77
CCDC40-212ENST00000574799 BRCA2P51587 3418 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 MAP3K7O43318 606 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 GFPT2O94808 682 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 KRT15P19012 456 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 PTDSS1P48651 473 aaKnown RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 NT5C2P49902 561 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 DEUP1Q05D60 604 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 BNIP1Q12981 228 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 UNC13DQ70J99 1090 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 KIFAP3Q92845 792 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 BIN2Q9UBW5 565 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 PHIPQ8WWQ0 1821 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 FAM196BA6NMK8 535 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 ENTPD5O75356 428 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 RNF8O76064 485 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 CACNA2D1P54289 1103 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 STRN3Q13033 797 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 PICALMQ13492 652 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 CNGA2Q16280 664 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 C10orf76Q5T2E6 689 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 GUF1Q8N442 669 aaKnown RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 UBL4BQ8N7F7 174 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 PDCD7Q8N8D1 485 aaKnown RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 TPCN2Q8NHX9 752 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 TLCD1Q96CP7 247 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 AK8Q96MA6 479 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 PIGSQ96S52 555 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 TMEM165Q9HC07 324 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 RIC8AQ9NPQ8 531 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 TMEM260Q9NX78 707 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 NKX1-2Q9UD57 310 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 A0A1B0GVG6 124 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 SPOPO43791 374 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 ATP5HO75947 161 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 TNFAIP3P21580 790 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 SP100P23497 879 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 EPHB2P29323 1055 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 STAT1P42224 750 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 CALCRLQ16602 461 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 CENPPQ6IPU0 288 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 TTBK2Q6IQ55 1244 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 PHLDB3Q6NSJ2 640 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 DPP8Q6V1X1 898 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 ATXN2LQ8WWM7 1075 aaKnown RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 DDX12PQ92771 950 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 DTNBP1Q96EV8 351 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 ANKRD27Q96NW4 1050 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 LRRC4CQ9HCJ2 640 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 C6orf50Q9HD87 102 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 BZW2Q9Y6E2 419 aaKnown RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 FRMPD2Q68DX3 1309 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-212ENST00000574799 RLFQ13129 1914 aa10.26□□□□□ -0.77
CCDC40-212ENST00000574799 TXNDC9O14530 226 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 ATP9AO75110 1047 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TPP2P29144 1249 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 CRKP46108 304 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 GNAQP50148 359 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 CDR2Q01850 454 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TNIP1Q15025 636 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 HGSNATQ68CP4 663 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 ZNF772Q68DY9 489 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 CAPN12Q6ZSI9 719 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 CCDC65Q8IXS2 484 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 RNF168Q8IYW5 571 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 RBM41Q96IZ5 413 aaKnown RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 CYP39A1Q9NYL5 469 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 LARSQ9P2J5 1176 aaKnown RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 PGAP2Q9UHJ9 254 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 MYMKA6NI61 221 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TTC36A6NLP5 189 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 LCA5LO95447 670 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 LDHCP07864 332 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 NR2F2P24468 414 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 KCNH2Q12809 1159 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 RCN1Q15293 331 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TMED2Q15363 201 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TRIP13Q15645 432 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 FYB2Q5VWT5 728 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 STYK1Q6J9G0 422 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TATDN1Q6P1N9 297 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 LRRC47Q8N1G4 583 aaKnown RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 OPTNQ96CV9 577 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 RMDN2Q96LZ7 410 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 CYTH2Q99418 400 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 C7orf25Q9BPX7 421 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 NAGPAQ9UK23 515 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 PASKQ96RG2 1323 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 ANKRD33BA6NCL7 494 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 A6NHS1 94 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 O00370 1275 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 ECE2O60344 883 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TLR2O60603 784 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 UNC5CO95185 931 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 GNA14O95837 355 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 XRCC5P13010 732 aaKnown RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 DESP17661 470 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms