RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 MRPL43Q8N983 215 aaKnown RBP18.25■□□□□ 0.51
TVP23B-207ENST00000574294 SMRP1Q8NCR6 262 aa18.25■□□□□ 0.51
TVP23B-207ENST00000574294 SMG8Q8ND04 991 aaKnown RBP18.25■□□□□ 0.51
TVP23B-207ENST00000574294 BHMT2Q9H2M3 363 aa18.25■□□□□ 0.51
TVP23B-207ENST00000574294 FZD8Q9H461 694 aa18.25■□□□□ 0.51
TVP23B-207ENST00000574294 DDX19AQ9NUU7 478 aaKnown RBP18.25■□□□□ 0.51
TVP23B-207ENST00000574294 KCNG1Q9UIX4 513 aa18.25■□□□□ 0.51
TVP23B-207ENST00000574294 IRAK3Q9Y616 596 aa18.25■□□□□ 0.51
TVP23B-207ENST00000574294 A0A087WWV3 80 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 SLC26A4O43511 780 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 HOXB8P17481 243 aaPredicted RBP18.24■□□□□ 0.51
TVP23B-207ENST00000574294 SSTR3P32745 418 aaPredicted RBP18.24■□□□□ 0.51
TVP23B-207ENST00000574294 MAPK6Q16659 721 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 MAEAQ7L5Y9 396 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 TMEM87AQ8NBN3 555 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 DEPTORQ8TB45 409 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 TIPINQ9BVW5 301 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 NT5C3AQ9H0P0 336 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 GPRC5CQ9NQ84 441 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 CLEC1BQ9P126 229 aa18.24■□□□□ 0.51
TVP23B-207ENST00000574294 N4BP3O15049 544 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 GLP2RO95838 553 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 ALADP13716 330 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 ZP2Q05996 745 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 CUL4AQ13619 759 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 KCNC3Q14003 757 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 APBB1IPQ7Z5R6 666 aaPredicted RBP18.23■□□□□ 0.51
TVP23B-207ENST00000574294 VPS52Q8N1B4 723 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 CPB2Q96IY4 423 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 ADPGKQ9BRR6 497 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 EIF2AQ9BY44 585 aaKnown RBP18.23■□□□□ 0.51
TVP23B-207ENST00000574294 GBP3Q9H0R5 595 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 C17orf75Q9HAS0 396 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 FAN1Q9Y2M0 1017 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 PCDHGC5Q9Y5F6 944 aa18.23■□□□□ 0.51
TVP23B-207ENST00000574294 TDRD15B5MCY1 1934 aaKnown RBP18.22■□□□□ 0.51
TVP23B-207ENST00000574294 C2orf71A6NGG8 1288 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 ARL5CA6NH57 179 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 C19orf67A6NJJ6 358 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 NT5C1B-RDH14C9J2C7 533 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 ACKR2O00590 384 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 PER2O15055 1255 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 CTSAP10619 480 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 PRPF4BQ13523 1007 aaKnown RBP18.22■□□□□ 0.51
TVP23B-207ENST00000574294 CLUL1Q15846 466 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 ZNF280BQ86YH2 543 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 CASP10Q92851 521 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 AK8Q96MA6 479 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 DRC1Q96MC2 740 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 ZBP1Q9H171 429 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 SSX2IPQ9Y2D8 614 aa18.22■□□□□ 0.51
TVP23B-207ENST00000574294 HIDE1A8MVS5 230 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 CXCL14O95715 111 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 POMCP01189 267 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 SLC11A1P49279 550 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 ECM1Q16610 540 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 TMEM132AQ24JP5 1023 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 TPRNQ4KMQ1 711 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 HYIQ5T013 277 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 PPFIBP1Q86W92 1011 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 KCND2Q9NZV8 630 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 DNAJB4Q9UDY4 337 aa18.21■□□□□ 0.51
TVP23B-207ENST00000574294 BARX2Q9UMQ3 279 aaPredicted RBP18.21■□□□□ 0.51
TVP23B-207ENST00000574294 RBM19Q9Y4C8 960 aaKnown RBP18.21■□□□□ 0.51
TVP23B-207ENST00000574294 PI4K2BG5E9Z4 385 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 B4GALT5O43286 388 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 DDHD2O94830 711 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 NPTXRO95502 500 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 PRKCBP05771 671 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 MLH1P40692 756 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 DSC1Q08554 894 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 ANKRD54Q6NXT1 300 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 CDK5RAP3Q96JB5 506 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 GAD1Q99259 594 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 CCDC113Q9H0I3 377 aa18.2■□□□□ 0.5
TVP23B-207ENST00000574294 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.19■□□□□ 0.5
TVP23B-207ENST00000574294 K7ERI5 159 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 NRP1O14786 923 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 ITIH3Q06033 890 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 GRIK3Q13003 919 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 DMP1Q13316 513 aaPredicted RBP18.19■□□□□ 0.5
TVP23B-207ENST00000574294 IL17AQ16552 155 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 DCAF4L1Q3SXM0 396 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 TMEM173Q86WV6 379 aaPredicted RBP18.19■□□□□ 0.5
TVP23B-207ENST00000574294 COLGALT2Q8IYK4 626 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 INTS4Q96HW7 963 aaKnown RBP18.19■□□□□ 0.5
TVP23B-207ENST00000574294 RPS6KC1Q96S38 1066 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 MMTAG2Q9BU76 263 aaKnown RBP18.19■□□□□ 0.5
TVP23B-207ENST00000574294 COLEC11Q9BWP8 271 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 EMILIN2Q9BXX0 1053 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 NXF3Q9H4D5 531 aaKnown RBP18.19■□□□□ 0.5
TVP23B-207ENST00000574294 CD320Q9NPF0 282 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 DZANK1Q9NVP4 752 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 USP15Q9Y4E8 981 aaPredicted RBP18.19■□□□□ 0.5
TVP23B-207ENST00000574294 HES2Q9Y543 173 aa18.19■□□□□ 0.5
TVP23B-207ENST00000574294 VWA3AA6NCI4 1184 aa18.18■□□□□ 0.5
TVP23B-207ENST00000574294 E9PMD0 336 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms