RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TMEM169Q96HH4 297 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 ZFP42Q96MM3 310 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 GAD1Q99259 594 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 TMEM175Q9BSA9 504 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 C1QTNF1Q9BXJ1 281 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 NXF3Q9H4D5 531 aaKnown RBP19.31■□□□□ 0.68
SMG6-214ENST00000573827 MARCH5Q9NX47 278 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 FSD2A1L4K1 749 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 ARHGEF35A5YM69 484 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 LAD1O00515 517 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 LILRB3O75022 631 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 CLASP2O75122 1294 aaKnown RBP19.3■□□□□ 0.68
SMG6-214ENST00000573827 POMCP01189 267 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 CTSAP10619 480 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 ITGA4P13612 1032 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 MCM2P49736 904 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 ATP2C1P98194 919 aaPredicted RBP19.3■□□□□ 0.68
SMG6-214ENST00000573827 ANKRD54Q6NXT1 300 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 KCNK18Q7Z418 384 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 COLGALT2Q8IYK4 626 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 RNF168Q8IYW5 571 aaPredicted RBP19.3■□□□□ 0.68
SMG6-214ENST00000573827 VPS52Q8N1B4 723 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 AUTS2Q8WXX7 1259 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 PRIMPOLQ96LW4 560 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 GBP3Q9H0R5 595 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 BHMT2Q9H2M3 363 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 POLD4Q9HCU8 107 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 UBN1Q9NPG3 1134 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 KANSL3Q9P2N6 904 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 KIAA1024Q9UPX6 916 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 HCFC2Q9Y5Z7 792 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 ZDBF2Q9HCK1 2354 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 TECTAO75443 2155 aa19.3■□□□□ 0.68
SMG6-214ENST00000573827 CARNS1A5YM72 827 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 LRRIQ4A6NIV6 560 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 CDC25AP30304 524 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 SSTR3P32745 418 aaPredicted RBP19.29■□□□□ 0.68
SMG6-214ENST00000573827 MLH1P40692 756 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 RNASELQ05823 741 aaKnown RBP19.29■□□□□ 0.68
SMG6-214ENST00000573827 CBX2Q14781 532 aaPredicted RBP19.29■□□□□ 0.68
SMG6-214ENST00000573827 PTPN14Q15678 1187 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 RILPL1Q5EBL4 403 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 SLC27A1Q6PCB7 646 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 DAW1Q8N136 415 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 URGCPQ8TCY9 931 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 SNX29Q8TEQ0 813 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 LRFN3Q9BTN0 628 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 UPF2Q9HAU5 1272 aaKnown RBP19.29■□□□□ 0.68
SMG6-214ENST00000573827 DDX19AQ9NUU7 478 aaKnown RBP19.29■□□□□ 0.68
SMG6-214ENST00000573827 PRMT7Q9NVM4 692 aaPredicted RBP19.29■□□□□ 0.68
SMG6-214ENST00000573827 RAPGEFL1Q9UHV5 662 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 KIF3AQ9Y496 699 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 PIEZO1Q92508 2521 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 ZMYM2Q9UBW7 1377 aa19.29■□□□□ 0.68
SMG6-214ENST00000573827 LOC730098B7Z3J9 87 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 NRP1O14786 923 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 GPR37L1O60883 481 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 NAMPTP43490 491 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 SCNN1GP51170 649 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 CUL4AQ13619 759 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 KIFC3Q9BVG8 833 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 PDZD7Q9H5P4 517 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 USP20Q9Y2K6 914 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 GIT1Q9Y2X7 761 aa19.28■□□□□ 0.68
SMG6-214ENST00000573827 E9PMD0 336 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 F8W810 466 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 NPTXRO95502 500 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 CXCL14O95715 111 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 COL9A1P20849 921 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 AKAP5P24588 427 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 MAPK7Q13164 816 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 HYIQ5T013 277 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 MCTP1Q6DN14 999 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 LLGL2Q6P1M3 1020 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 SLC22A17Q8WUG5 538 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 PNMA5Q96PV4 448 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 CXCL16Q9H2A7 254 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 CDH22Q9UJ99 828 aa19.27■□□□□ 0.68
SMG6-214ENST00000573827 ZNF318Q5VUA4 2279 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 ACKR2O00590 384 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 NCBP1Q09161 790 aaKnown RBP19.26■□□□□ 0.67
SMG6-214ENST00000573827 EEF1DP3Q658K8 133 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 DTHD1Q6ZMT9 781 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 TAS1R1Q7RTX1 841 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 FEZF2Q8TBJ5 459 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 POP1Q99575 1024 aaKnown RBP19.26■□□□□ 0.67
SMG6-214ENST00000573827 RUSC1Q9BVN2 902 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 C2orf40Q9H1Z8 148 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 STK24Q9Y6E0 443 aa19.26■□□□□ 0.67
SMG6-214ENST00000573827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.25■□□□□ 0.67
SMG6-214ENST00000573827 FAM86C2PA6NEL3 165 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 DCXO43602 365 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 ALDH2P05091 517 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 PRKCBP05771 671 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 HOXB8P17481 243 aaPredicted RBP19.25■□□□□ 0.67
SMG6-214ENST00000573827 NT5DC1Q5TFE4 455 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 C1orf186Q6ZWK4 172 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 RNF135Q8IUD6 432 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 ZBTB8OSQ8IWT0 167 aa19.25■□□□□ 0.67
SMG6-214ENST00000573827 KIFAP3Q92845 792 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms