RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LRRC4Q9HBW1 653 aa10.9□□□□□ -0.66
SMG6-213ENST00000573166 NID2Q14112 1375 aa10.9□□□□□ -0.67
SMG6-213ENST00000573166 UBE4BO95155 1302 aa10.9□□□□□ -0.67
SMG6-213ENST00000573166 RPLP2P05387 115 aaKnown RBP10.89□□□□□ -0.67
SMG6-213ENST00000573166 AP3M2P53677 418 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 HTRA3P83110 453 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 TMEM132DQ14C87 1099 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 PLCB4Q15147 1175 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 UBL4BQ8N7F7 174 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 GOLGA8SH3BPF8 625 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 TOM1L1O75674 476 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 FARP2O94887 1054 aaPredicted RBP10.89□□□□□ -0.67
SMG6-213ENST00000573166 SLC10A3P09131 477 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 RAG1P15918 1043 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 SCP2P22307 547 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 DHX40Q8IX18 779 aaKnown RBP10.89□□□□□ -0.67
SMG6-213ENST00000573166 THEM5Q8N1Q8 247 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 DPF3Q92784 378 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 PDE11AQ9HCR9 933 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 ADAMTS1Q9UHI8 967 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 MTUS1Q9ULD2 1270 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 SLC16A3O15427 465 aaKnown RBP10.89□□□□□ -0.67
SMG6-213ENST00000573166 CABYRO75952 493 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 PTPROQ16827 1216 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 ZNF560Q96MR9 790 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 GOLGA6L10A6NI86 522 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 PPP1R3GB7ZBB8 358 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 OGTO15294 1046 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 AP5Z1O43299 807 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 CLTAP09496 248 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 HOXC6P09630 235 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 GHRP10912 638 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 MAP2K2P36507 400 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 PTGISQ16647 500 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 MAF1Q9H063 256 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 INTS2Q9H0H0 1204 aaKnown RBP10.89□□□□□ -0.67
SMG6-213ENST00000573166 CREBZFQ9NS37 354 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 PPME1Q9Y570 386 aa10.89□□□□□ -0.67
SMG6-213ENST00000573166 ZNF536O15090 1300 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 NRCAMQ92823 1304 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 SYNJ2BP-COX16A0A087WUM0 186 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 CDC25BP30305 580 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 EIF4A3P38919 411 aaKnown RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 SARM1Q6SZW1 724 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 DAAM2Q86T65 1068 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 ZNF653Q96CK0 615 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 CBWD1Q9BRT8 395 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 KLK14Q9P0G3 267 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 COX16Q9P0S2 106 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 IGF2BP3O00425 579 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMG6-213ENST00000573166 BUB1O43683 1085 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 EXTL3O43909 919 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 RNF8O76064 485 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 TBXAS1P24557 533 aaPredicted RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 SNRPFP62306 86 aaKnown RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 MAP3K10Q02779 954 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 IQCB1Q15051 598 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 DEFB128Q7Z7B8 93 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 SYCE1Q8N0S2 351 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 KIAA1524Q8TCG1 905 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 NAPGQ99747 312 aaPredicted RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 OLFML3Q9NRN5 406 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 DIS3Q9Y2L1 958 aaKnown RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 SNX9Q9Y5X1 595 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 FRMPD4Q14CM0 1322 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 MYO1FO00160 1098 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 POLR3GO15318 223 aaPredicted RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 CCNE2O96020 404 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 FAM193AP78312 1265 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 RBP5P82980 135 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 RPS6KA1Q15418 735 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 NPY5RQ15761 445 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 IL17AQ16552 155 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 MSL3Q8N5Y2 521 aaKnown RBP10.88□□□□□ -0.67
SMG6-213ENST00000573166 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 SCFD1Q8WVM8 642 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 MKNK1Q9BUB5 465 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 TMEM39AQ9NV64 488 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 CEP72Q9P209 647 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 STIM2Q9P246 746 aa10.88□□□□□ -0.67
SMG6-213ENST00000573166 ACTN1P12814 892 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 FGFR4P22455 802 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 TSPY1Q01534 308 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 NCOA4Q13772 614 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 DRAP1Q14919 205 aaPredicted RBP10.87□□□□□ -0.67
SMG6-213ENST00000573166 CCL14Q16627 93 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 GLRA4Q5JXX5 417 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 PLPPR4Q7Z2D5 763 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 CPB2Q96IY4 423 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 A8MXQ7 604 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 SERPING1P05155 500 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 FMO5P49326 533 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 TERF1P54274 439 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 CBWD2Q8IUF1 395 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 SCN4BQ8IWT1 228 aa10.87□□□□□ -0.67
SMG6-213ENST00000573166 PPTC7Q8NI37 304 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms