RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 TSPAN1O60635 241 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 CXCL14O95715 111 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 ALDH2P05091 517 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 ATP2B1P20020 1258 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 HOXA11P31270 313 aaPredicted RBP10.8□□□□□ -0.68
CIITA-207ENST00000571545 ARL2P36404 184 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 MTHFRP42898 656 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 MBTD1Q05BQ5 628 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 LLGL2Q6P1M3 1020 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 SLC27A1Q6PCB7 646 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 AGMOQ6ZNB7 445 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 RNF135Q8IUD6 432 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 MFSD14AQ96MC6 490 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 GBP3Q9H0R5 595 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 ADAM7Q9H2U9 754 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 MINDY3Q9H8M7 445 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 C11orf16Q9NQ32 467 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 FAN1Q9Y2M0 1017 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 IPPQ9Y573 584 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 HCFC2Q9Y5Z7 792 aa10.8□□□□□ -0.68
CIITA-207ENST00000571545 FAM86C2PA6NEL3 165 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 NT5C1B-RDH14C9J2C7 533 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 N4BP3O15049 544 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 CLASP2O75122 1294 aaKnown RBP10.79□□□□□ -0.68
CIITA-207ENST00000571545 SEC24BO95487 1268 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 URODP06132 367 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 GLRA2P23416 452 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 NAMPTP43490 491 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 SLC11A1P49279 550 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 MCM2P49736 904 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 GUCY1B3Q02153 619 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 CREMQ03060 361 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 ST3GAL1Q11201 340 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 FAM187BQ17R55 369 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 LONRF3Q496Y0 759 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 CDCA2Q69YH5 1023 aaPredicted RBP10.79□□□□□ -0.68
CIITA-207ENST00000571545 CATSPER3Q86XQ3 398 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 VN1R2Q8NFZ6 395 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 ASAP3Q8TDY4 903 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 PIGOQ8TEQ8 1089 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 EDAQ92838 391 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 IFT74Q96LB3 600 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 RPS6KC1Q96S38 1066 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 ADPGKQ9BRR6 497 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 TMEM60Q9H2L4 133 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 SFXN1Q9H9B4 322 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 MRPL17Q9NRX2 175 aaKnown RBP10.79□□□□□ -0.68
CIITA-207ENST00000571545 MUTYHQ9UIF7 546 aa10.79□□□□□ -0.68
CIITA-207ENST00000571545 ARL5CA6NH57 179 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 ZBTB39O15060 712 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 C1RP00736 705 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 SOD2P04179 222 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 ADH1AP07327 375 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 SPATA31C1P0DKV0 1188 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 ARF4P18085 180 aaPredicted RBP10.78□□□□□ -0.68
CIITA-207ENST00000571545 U2AF2P26368 475 aaKnown RBP eCLIP10.78□□□□□ -0.68
CIITA-207ENST00000571545 MLH1P40692 756 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 PRPHP41219 470 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 EFNA5P52803 228 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 GRIK3Q13003 919 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 PDIA5Q14554 519 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 ZNF174Q15697 407 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 MAPK6Q16659 721 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 C8orf34Q49A92 452 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 KIAA1841Q6NSI8 718 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 SYCE2Q6PIF2 218 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 ZBTB33Q86T24 672 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 CABP7Q86V35 215 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 GPR65Q8IYL9 337 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 KCTD17Q8N5Z5 321 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
CIITA-207ENST00000571545 DEPTORQ8TB45 409 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 KIFAP3Q92845 792 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 RPGRIP1Q96KN7 1286 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 PRRX2Q99811 253 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 HERC2P3Q9BVR0 1158 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 S1PR5Q9H228 398 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 DNAJB4Q9UDY4 337 aa10.78□□□□□ -0.68
CIITA-207ENST00000571545 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 MEIS3P2A8K0S8 358 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 WNT7AO00755 349 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 DTNBO60941 627 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 MED24O75448 989 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 POMCP01189 267 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 CYP11B2P19099 503 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 CCT6AP40227 531 aaKnown RBP10.77□□□□□ -0.69
CIITA-207ENST00000571545 OR1G1P47890 313 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 GLUD2P49448 558 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 DSC1Q08554 894 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 PTPN14Q15678 1187 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 AMHR2Q16671 573 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 DCAF4L1Q3SXM0 396 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 RILPL1Q5EBL4 403 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 ATAT1Q5SQI0 421 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 CYP26C1Q6V0L0 522 aa10.77□□□□□ -0.69
CIITA-207ENST00000571545 BMP8AQ7Z5Y6 402 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms