RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 LLGL2Q6P1M3 1020 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 PADI6Q6TGC4 694 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 KCTD17Q8N5Z5 321 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 PDILTQ8N807 584 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 TMEM105Q8N8V8 129 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 COLGALT1Q8NBJ5 622 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 TMEM87AQ8NBN3 555 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 RASSF8Q8NHQ8 419 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 RAD54LQ92698 747 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 TYW1Q9NV66 732 aaKnown RBP23.82■■□□□ 1.4
UBFD1-210ENST00000571064 CCDC39Q9UFE4 941 aa23.82■■□□□ 1.4
UBFD1-210ENST00000571064 FNDC1Q4ZHG4 1894 aaPredicted RBP23.81■■□□□ 1.4
UBFD1-210ENST00000571064 FAM237AA0A1B0GTK4 181 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 A0A1B0GVL5 298 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 FSD2A1L4K1 749 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 ARHGEF35A5YM69 484 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 PLA2G4BP0C869 781 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 RFC5P40937 340 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 CLCN3P51790 818 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 SLC12A3P55017 1021 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 E2F4Q16254 413 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 RRAGBQ5VZM2 374 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 METTL13Q8N6R0 699 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 SYT2Q8N9I0 419 aaPredicted RBP23.81■■□□□ 1.4
UBFD1-210ENST00000571064 GOLPH3LQ9H4A5 285 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 HPSEQ9Y251 543 aa23.81■■□□□ 1.4
UBFD1-210ENST00000571064 USO1O60763 962 aaKnown RBP23.8■■□□□ 1.4
UBFD1-210ENST00000571064 GADD45BO75293 160 aaPredicted RBP23.8■■□□□ 1.4
UBFD1-210ENST00000571064 SRGAP2BP0DMP2 458 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 PFKFB1P16118 471 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 NBL1P41271 181 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 POLGP54098 1239 aaPredicted RBP23.8■■□□□ 1.4
UBFD1-210ENST00000571064 MCM6Q14566 821 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 EMC2Q15006 297 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 PDE12Q6L8Q7 609 aaKnown RBP23.8■■□□□ 1.4
UBFD1-210ENST00000571064 ADAM2Q99965 735 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 RUSC1Q9BVN2 902 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 SMOC2Q9H3U7 446 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 FAM13BQ9NYF5 915 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 GINS2Q9Y248 185 aa23.8■■□□□ 1.4
UBFD1-210ENST00000571064 HIDE1A8MVS5 230 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 RINT1Q6NUQ1 792 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 CCDC73Q6ZRK6 1079 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 FSIP1Q8NA03 581 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 TMEM143Q96AN5 459 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 CCDC43Q96MW1 224 aaKnown RBP23.79■■□□□ 1.4
UBFD1-210ENST00000571064 CDHR5Q9HBB8 845 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 ERVK-5Q9HDB9 667 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 KCNH3Q9ULD8 1083 aa23.79■■□□□ 1.4
UBFD1-210ENST00000571064 POLR2DO15514 142 aaKnown RBP23.78■■□□□ 1.4
UBFD1-210ENST00000571064 DGAT1O75907 488 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 CYP11B2P19099 503 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 STAT6P42226 847 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 NDUFA8P51970 172 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 MTMR3Q13615 1198 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 ARSHQ5FYA8 562 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 C1orf186Q6ZWK4 172 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 SLC7A3Q8WY07 619 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 DHX58Q96C10 678 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 TCF25Q9BQ70 676 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 CWH43Q9H720 699 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 POLD4Q9HCU8 107 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 STK17AQ9UEE5 414 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 SORCS3Q9UPU3 1222 aa23.78■■□□□ 1.4
UBFD1-210ENST00000571064 NOC2LQ9Y3T9 749 aaKnown RBP23.78■■□□□ 1.4
UBFD1-210ENST00000571064 RIF1Q5UIP0 2472 aaKnown RBP23.78■■□□□ 1.4
UBFD1-210ENST00000571064 DENND3A2RUS2 1198 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 C2CD4DB7Z1M9 353 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 VTNP04004 478 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 SSBP05455 408 aaKnown RBP eCLIP23.77■■□□□ 1.4
UBFD1-210ENST00000571064 FGFR1P11362 822 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 DHX8Q14562 1220 aaKnown RBP23.77■■□□□ 1.4
UBFD1-210ENST00000571064 MAEAQ7L5Y9 396 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 UBALD2Q8IYN6 164 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 NME8Q8N427 588 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 TMEM40Q8WWA1 233 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 MRPS27Q92552 414 aaKnown RBP23.77■■□□□ 1.4
UBFD1-210ENST00000571064 LARP4BQ92615 738 aaKnown RBP23.77■■□□□ 1.4
UBFD1-210ENST00000571064 MTRQ99707 1265 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 ATP6V0A4Q9HBG4 840 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 GPRC5CQ9NQ84 441 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 ENTPD7Q9NQZ7 604 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 RGS18Q9NS28 235 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 SUCLA2Q9P2R7 463 aaPredicted RBP23.77■■□□□ 1.4
UBFD1-210ENST00000571064 NR2E1Q9Y466 385 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 MYO10Q9HD67 2058 aa23.77■■□□□ 1.4
UBFD1-210ENST00000571064 FAM186AA6NE01 2351 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 NPHP3-ACAD11A0A0J9YXS1 232 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 C9IYK1 514 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 RPS6KA5O75582 802 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 HOXB8P17481 243 aaPredicted RBP23.76■■□□□ 1.39
UBFD1-210ENST00000571064 ARL2P36404 184 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 SLC24A5Q71RS6 500 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 JPH2Q9BR39 696 aaPredicted RBP23.76■■□□□ 1.39
UBFD1-210ENST00000571064 POMKQ9H5K3 350 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 C1orf112Q9NSG2 853 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 ST3GAL5Q9UNP4 418 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 LZTS1Q9Y250 596 aa23.76■■□□□ 1.39
UBFD1-210ENST00000571064 LAG3P18627 525 aa23.75■■□□□ 1.39
UBFD1-210ENST00000571064 TMOD1P28289 359 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms