RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 NR1I2O75469 434 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 ERLIN2O94905 339 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 OR1G1P47890 313 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 ID4P47928 161 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 COLGALT2Q8IYK4 626 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 HDAC7Q8WUI4 952 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 CCDC51Q96ER9 411 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 SEMA4AQ9H3S1 761 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 RXFP1Q9HBX9 757 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 MARCH5Q9NX47 278 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 EPS15L1Q9UBC2 864 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 CLUHO75153 1309 aa21.2■□□□□ 0.98
SCARF1-204ENST00000570902 NARSO43776 548 aaKnown RBP21.19■□□□□ 0.98
SCARF1-204ENST00000570902 N4BP1O75113 896 aaKnown RBP21.19■□□□□ 0.98
SCARF1-204ENST00000570902 C1RP00736 705 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 NEFLP07196 543 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 CFHP08603 1231 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 AXLP30530 894 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 NCBP1Q09161 790 aaKnown RBP21.19■□□□□ 0.98
SCARF1-204ENST00000570902 INF2Q27J81 1249 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 KIAA0319Q5VV43 1072 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 CPLX2Q6PUV4 134 aaKnown RBP21.19■□□□□ 0.98
SCARF1-204ENST00000570902 OTUD6AQ7L8S5 288 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 C4orf19Q8IY42 314 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 RNF168Q8IYW5 571 aaPredicted RBP21.19■□□□□ 0.98
SCARF1-204ENST00000570902 ZNF579Q8NAF0 562 aaKnown RBP21.19■□□□□ 0.98
SCARF1-204ENST00000570902 RNF149Q8NC42 400 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 SMG8Q8ND04 991 aaKnown RBP21.19■□□□□ 0.98
SCARF1-204ENST00000570902 KCNMB3Q9NPA1 279 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 IPPQ9Y573 584 aa21.19■□□□□ 0.98
SCARF1-204ENST00000570902 ARL5CA6NH57 179 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 GCFC2P16383 781 aaKnown RBP21.18■□□□□ 0.98
SCARF1-204ENST00000570902 YWHABP31946 246 aaKnown RBP21.18■□□□□ 0.98
SCARF1-204ENST00000570902 DSG1Q02413 1049 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 EMC2Q15006 297 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 NPY5RQ15761 445 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 NOTUMQ6P988 496 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 TAS1R1Q7RTX1 841 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 FERMT3Q86UX7 667 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 SMG7Q92540 1137 aaKnown RBP21.18■□□□□ 0.98
SCARF1-204ENST00000570902 PLEKHA4Q9H4M7 779 aa21.18■□□□□ 0.98
SCARF1-204ENST00000570902 CCDC194A0A1B0GVG4 234 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 REC8O95072 547 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 EFEMP2O95967 443 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 SRFP11831 508 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 DSC1Q08554 894 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 EPHA7Q15375 998 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 PPP4R3AQ6IN85 833 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 RUFY3Q7L099 469 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 HACE1Q8IYU2 909 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 SLC44A3Q8N4M1 653 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 RSAD2Q8WXG1 361 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 ZNF274Q96GC6 653 aaPredicted RBP21.17■□□□□ 0.98
SCARF1-204ENST00000570902 GAD1Q99259 594 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 NAP1L4Q99733 375 aaKnown RBP21.17■□□□□ 0.98
SCARF1-204ENST00000570902 LXNQ9BS40 222 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 COLEC11Q9BWP8 271 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 PIDD1Q9HB75 910 aa21.17■□□□□ 0.98
SCARF1-204ENST00000570902 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCARF1-204ENST00000570902 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCARF1-204ENST00000570902 WRAP73Q9P2S5 460 aaPredicted RBP21.17■□□□□ 0.98
SCARF1-204ENST00000570902 KRBA1A5PL33 1030 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 TBX3O15119 743 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 PAPLNO95428 1278 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 MLH1P40692 756 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 TOB2Q14106 344 aaPredicted RBP21.16■□□□□ 0.98
SCARF1-204ENST00000570902 MXD4Q14582 209 aaPredicted RBP21.16■□□□□ 0.98
SCARF1-204ENST00000570902 NEK8Q86SG6 692 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 GPR65Q8IYL9 337 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 KCNG4Q8TDN1 519 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 MTRQ99707 1265 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 EIF2AQ9BY44 585 aaKnown RBP21.16■□□□□ 0.98
SCARF1-204ENST00000570902 ZSWIM4Q9H7M6 989 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 BMP2KQ9NSY1 1161 aaPredicted RBP21.16■□□□□ 0.98
SCARF1-204ENST00000570902 ZDHHC7Q9NXF8 308 aa21.16■□□□□ 0.98
SCARF1-204ENST00000570902 MARCH6O60337 910 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 TSPAN1O60635 241 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 RFPL2O75678 378 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 LMNAP02545 664 aaKnown RBP21.15■□□□□ 0.98
SCARF1-204ENST00000570902 CENPBP07199 599 aaPredicted RBP21.15■□□□□ 0.98
SCARF1-204ENST00000570902 SCNN1GP51170 649 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 PTENP60484 403 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 CREMQ03060 361 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 TFDP1Q14186 410 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 XKR9Q5GH70 373 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 ZNF707Q96C28 371 aaPredicted RBP21.15■□□□□ 0.98
SCARF1-204ENST00000570902 MYADMQ96S97 322 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 TRIM6Q9C030 488 aaPredicted RBP21.15■□□□□ 0.98
SCARF1-204ENST00000570902 CSRNP2Q9H175 543 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 TBC1D17Q9HA65 648 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 CHST7Q9NS84 486 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 CA14Q9ULX7 337 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 GIT1Q9Y2X7 761 aa21.15■□□□□ 0.98
SCARF1-204ENST00000570902 CCNT1O60563 726 aaKnown RBP21.14■□□□□ 0.97
SCARF1-204ENST00000570902 USP41Q3LFD5 358 aa21.14■□□□□ 0.97
SCARF1-204ENST00000570902 PHLDB3Q6NSJ2 640 aa21.14■□□□□ 0.97
SCARF1-204ENST00000570902 PALB2Q86YC2 1186 aa21.14■□□□□ 0.97
SCARF1-204ENST00000570902 AIFM3Q96NN9 605 aa21.14■□□□□ 0.97
SCARF1-204ENST00000570902 NT5C3AQ9H0P0 336 aa21.14■□□□□ 0.97
SCARF1-204ENST00000570902 RNF39Q9H2S5 420 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms