RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 GNL3LQ9NVN8 582 aaKnown RBP8.31□□□□□ -1.08
CNOT1-222ENST00000570139 DDX20Q9UHI6 824 aaKnown RBP8.31□□□□□ -1.08
CNOT1-222ENST00000570139 FAM50BQ9Y247 325 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 RFX7Q2KHR2 1363 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 NRXN2Q9P2S2 1712 aa8.31□□□□□ -1.08
CNOT1-222ENST00000570139 MROH5Q6ZUA9 1318 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 AP1G1O43747 822 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 SASH1O94885 1247 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 ZRANB2O95218 330 aaKnown RBP eCLIP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 NOS3P29474 1203 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 SF3B3Q15393 1217 aaKnown RBP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 B3GNT9Q6UX72 402 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 TOGARAM2Q6ZUX3 1019 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 CHST15Q7LFX5 561 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 FAM43AQ8N2R8 423 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 HEXIM2Q96MH2 286 aaKnown RBP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 FAM193BQ96PV7 902 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 TAAR9Q96RI9 348 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 FOXP3Q9BZS1 431 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 CDIP1Q9H305 208 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 USP36Q9P275 1121 aaKnown RBP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 PA2G4Q9UQ80 394 aaKnown RBP8.3□□□□□ -1.08
CNOT1-222ENST00000570139 A0A1B0GUL6 1792 aa8.3□□□□□ -1.08
CNOT1-222ENST00000570139 C7orf72A4D263 438 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 HIP1O00291 1037 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 NPHP1O15259 732 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 PMM2O15305 246 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 EPB41L2O43491 1005 aaKnown RBP8.29□□□□□ -1.08
CNOT1-222ENST00000570139 TCEA3O75764 348 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 GSPT1P15170 499 aaKnown RBP8.29□□□□□ -1.08
CNOT1-222ENST00000570139 PDE6BP35913 854 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 IGHMBP2P38935 993 aaKnown RBP8.29□□□□□ -1.08
CNOT1-222ENST00000570139 ANP32AP39687 249 aaKnown RBP8.29□□□□□ -1.08
CNOT1-222ENST00000570139 ADKP55263 362 aaKnown RBP8.29□□□□□ -1.08
CNOT1-222ENST00000570139 SNRPNP63162 240 aaKnown RBP8.29□□□□□ -1.08
CNOT1-222ENST00000570139 CYP27A1Q02318 531 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 POU5F1BQ06416 359 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 FIGNQ5HY92 759 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 TBC1D9BQ66K14 1250 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 BEND4Q6ZU67 534 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 AACSQ86V21 672 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 SKAP1Q86WV1 359 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 CMIPQ8IY22 773 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 CNTROBQ8N137 903 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 SVOPQ8N4V2 548 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 CNBD1Q8NA66 436 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 SIL1Q9H173 461 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 EPB41L1Q9H4G0 881 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 PPCSQ9HAB8 311 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 SP110Q9HB58 689 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 IL1RAPL2Q9NP60 686 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 DNAJC28Q9NX36 388 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 TFCP2L1Q9NZI6 479 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 KCNG1Q9UIX4 513 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 FBXL7Q9UJT9 491 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 PTPN22Q9Y2R2 807 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 FPGT-TNNI3KV9GXZ4 949 aa8.29□□□□□ -1.08
CNOT1-222ENST00000570139 DHX15O43143 795 aaKnown RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 FKTNO75072 461 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 WDHD1O75717 1129 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 GYS1P13807 737 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 RHCEP18577 417 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 IREB2P48200 963 aaKnown RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 RHDQ02161 417 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 GALEQ14376 348 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 INO80DQ53TQ3 878 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 LDHAL6AQ6ZMR3 332 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 ATG9AQ7Z3C6 839 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 THAP5Q7Z6K1 395 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 PTRH1Q86Y79 214 aaKnown RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 NOSTRINQ8IVI9 506 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 C16orf71Q8IYS4 520 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 NLGN4XQ8N0W4 816 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 ARMC10Q8N2F6 343 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 TBC1D32Q96NH3 1257 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 MPHOSPH8Q99549 860 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 JAM3Q9BX67 310 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 GREM2Q9H772 168 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 ZMAT4Q9H898 229 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 NLRC4Q9NPP4 1024 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 PLCB1Q9NQ66 1216 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 CNNM1Q9NRU3 951 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 KLHL11Q9NVR0 708 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 STK32BQ9NY57 414 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 SRP68Q9UHB9 627 aaKnown RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 PHTF1Q9UMS5 762 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 COA3Q9Y2R0 106 aaPredicted RBP8.28□□□□□ -1.08
CNOT1-222ENST00000570139 NUB1Q9Y5A7 615 aa8.28□□□□□ -1.08
CNOT1-222ENST00000570139 TNRC6CQ9HCJ0 1690 aaKnown RBP8.27□□□□□ -1.08
CNOT1-222ENST00000570139 WTIPA6NIX2 430 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-222ENST00000570139 DGKIO75912 1065 aa8.27□□□□□ -1.09
CNOT1-222ENST00000570139 REC8O95072 547 aa8.27□□□□□ -1.09
CNOT1-222ENST00000570139 FGAP02671 866 aa8.27□□□□□ -1.09
CNOT1-222ENST00000570139 AMY2AP04746 511 aa8.27□□□□□ -1.09
CNOT1-222ENST00000570139 ATP5JP18859 108 aa8.27□□□□□ -1.09
CNOT1-222ENST00000570139 AMY2BP19961 511 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms