RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 NAA16Q6N069 864 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 TATDN1Q6P1N9 297 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 C16orf59Q7L2K0 433 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 SPACA3Q8IXA5 215 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 ZNF655Q8N720 491 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 MB21D1Q8N884 522 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 OSBP2Q969R2 916 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 MAML3Q96JK9 1138 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 NEUROD6Q96NK8 337 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 SPOCK3Q9BQ16 436 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 SPATC1LQ9H0A9 340 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 SLKQ9H2G2 1235 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 MTIF3Q9H2K0 278 aaKnown RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 TRIT1Q9H3H1 467 aaKnown RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 RPAP3Q9H6T3 665 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 DNAJC18Q9H819 358 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 STARD7Q9NQZ5 370 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 GPATCH2Q9NW75 528 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 AATFQ9NY61 560 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 PLAGL2Q9UPG8 496 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 GPR55Q9Y2T6 319 aaPredicted RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 MRPS23Q9Y3D9 190 aaKnown RBP7.2□□□□□ -1.26
UBFD1-209ENST00000569919 MROH7Q68CQ1 1323 aa7.2□□□□□ -1.26
UBFD1-209ENST00000569919 WASH4PA8MWX3 477 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 GRXCR1A8MXD5 290 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 H3BS24 57 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 ERC2O15083 957 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 CYP26A1O43174 497 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 PGK1P00558 417 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 FGBP02675 491 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 GSNP06396 782 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 UQCRFS1P1P0C7P4 283 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 VCAM1P19320 739 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 NCLP19338 710 aaKnown RBP7.19□□□□□ -1.26
UBFD1-209ENST00000569919 HOXC12P31275 282 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 ACLYP53396 1101 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 POU4F1Q01851 419 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 RAB3GAP1Q15042 981 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 CERKLQ49MI3 558 aaPredicted RBP7.19□□□□□ -1.26
UBFD1-209ENST00000569919 CWF19L1Q69YN2 538 aaKnown RBP7.19□□□□□ -1.26
UBFD1-209ENST00000569919 PSRC1Q6PGN9 363 aaPredicted RBP7.19□□□□□ -1.26
UBFD1-209ENST00000569919 CRTC3Q6UUV7 619 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 ZNF365Q70YC5 407 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 ZDHHC13Q8IUH4 622 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 MAPKAPK5Q8IW41 473 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 TCTN2Q96GX1 697 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 HSPA12BQ96MM6 686 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 NKX2-4Q9H2Z4 354 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 COG5Q9UP83 839 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 PA2G4Q9UQ80 394 aaKnown RBP7.19□□□□□ -1.26
UBFD1-209ENST00000569919 VCANP13611 3396 aa7.19□□□□□ -1.26
UBFD1-209ENST00000569919 EYSQ5T1H1 3165 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 MYO9BQ13459 2157 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 MSTNO14793 375 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 DLX3O60479 287 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 SLC25A27O95847 323 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 AKR1A1P14550 325 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 CSF2RAP15509 400 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 POU3F3P20264 500 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-209ENST00000569919 CDK7P50613 346 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 TFF2Q03403 129 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 TFCP2Q12800 502 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 PLS1Q14651 629 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 CBX2Q14781 532 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-209ENST00000569919 KCNA10Q16322 511 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 ABCB5Q2M3G0 1257 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 SHROOM1Q2M3G4 852 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-209ENST00000569919 TSPYL5Q86VY4 417 aaPredicted RBP7.18□□□□□ -1.26
UBFD1-209ENST00000569919 CERS3Q8IU89 383 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 PLD6Q8N2A8 252 aaKnown RBP7.18□□□□□ -1.26
UBFD1-209ENST00000569919 ACER1Q8TDN7 264 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 CCDC140Q96MF4 163 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 GLT1D1Q96MS3 346 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 MCMBPQ9BTE3 642 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 CYP26B1Q9NR63 512 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 ZSWIM5Q9P217 1185 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 SERPINB13Q9UIV8 391 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 TBX21Q9UL17 535 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 TCF20Q9UGU0 1960 aaKnown RBP7.18□□□□□ -1.26
UBFD1-209ENST00000569919 ELP1O95163 1332 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 FLT1P17948 1338 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 ZNF521Q96K83 1311 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 SMCHD1A6NHR9 2005 aa7.18□□□□□ -1.26
UBFD1-209ENST00000569919 SPTBN5Q9NRC6 3674 aaKnown RBP7.17□□□□□ -1.26
UBFD1-209ENST00000569919 PRR19A6NJB7 356 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 SMIM22K7EJ46 135 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 DYRK3O43781 588 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 SNRPB2P08579 225 aaKnown RBP7.17□□□□□ -1.26
UBFD1-209ENST00000569919 TPP2P29144 1249 aaPredicted RBP7.17□□□□□ -1.26
UBFD1-209ENST00000569919 KCNJ6P48051 423 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 KCNQ1P51787 676 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 CLCN7P51798 805 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 GFRA1P56159 465 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 SUMO1P63165 101 aaKnown RBP7.17□□□□□ -1.26
UBFD1-209ENST00000569919 CCDC184Q52MB2 194 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 PCSK9Q8NBP7 692 aaKnown RBP7.17□□□□□ -1.26
UBFD1-209ENST00000569919 KLHDC9Q8NEP7 349 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 NETO1Q8TDF5 533 aa7.17□□□□□ -1.26
UBFD1-209ENST00000569919 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms