RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 IFT80Q9P2H3 777 aaPredicted RBP7.18□□□□□ -1.26
SMG1-217ENST00000569764 GIMAP2Q9UG22 337 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 DGKBQ9Y6T7 804 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 POU3F3P20264 500 aaPredicted RBP7.18□□□□□ -1.26
SMG1-217ENST00000569764 PTPREP23469 700 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 GBP2P32456 591 aaPredicted RBP7.18□□□□□ -1.26
SMG1-217ENST00000569764 MNAT1P51948 309 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 ANTXR2P58335 489 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 OASLQ15646 514 aaKnown RBP7.18□□□□□ -1.26
SMG1-217ENST00000569764 CES5AQ6NT32 575 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 CRTC1Q6UUV9 634 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 TMC7Q7Z402 723 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 GALNT6Q8NCL4 622 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 ADPGKQ9BRR6 497 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 FAM167BQ9BTA0 163 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 ALG13Q9NP73 1137 aaKnown RBP7.18□□□□□ -1.26
SMG1-217ENST00000569764 SH3BGRL2Q9UJC5 107 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 MTMR6Q9Y217 621 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 EPN1Q9Y6I3 576 aaPredicted RBP7.18□□□□□ -1.26
SMG1-217ENST00000569764 THAP12O43422 761 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 PRKAB2O43741 272 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 PRDX5P30044 214 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 AMPD2Q01433 879 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 MPP3Q13368 585 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 SEPT6Q14141 434 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 DGKDQ16760 1214 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 BLOC1S2Q6QNY1 142 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 SASS6Q6UVJ0 657 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 ENOSF1Q7L5Y1 443 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 NANOGNBQ7Z5D8 188 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 FAM76AQ8TAV0 307 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 EDEM3Q9BZQ6 932 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 ARMT1Q9H993 441 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 PCDHB12Q9Y5F1 795 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 RFX7Q2KHR2 1363 aa7.18□□□□□ -1.26
SMG1-217ENST00000569764 J3KRW8 73 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 DYNC1LI2O43237 492 aaPredicted RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 HARSP12081 509 aaKnown RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 ELF1P32519 619 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 NUBP1P53384 320 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 SCRN1Q12765 414 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 OTOP3Q7RTS5 596 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 HOMER1Q86YM7 354 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 CCDC170Q8IYT3 715 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 TBC1D21Q8IYX1 336 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 ELMOD1Q8N336 334 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 BBOF1Q8ND07 529 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 EPS8L1Q8TE68 723 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 UCMAQ8WVF2 138 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 RABGGTAQ92696 567 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 RBM14Q96PK6 669 aaKnown RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 GCNAQ96QF7 691 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 MFSD1Q9H3U5 465 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 ADGRA2Q96PE1 1338 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 DNM1LO00429 736 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 PMM2O15305 246 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 MTSS1O43312 755 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 HOXA7P31268 230 aaPredicted RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 CDK8P49336 464 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 PAPOLAP51003 745 aaKnown RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 NEK2P51955 445 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 NAA30Q147X3 362 aaPredicted RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 CHRDL2Q6WN34 429 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 TBC1D10CQ8IV04 446 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 TRIML2Q8N7C3 387 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 IPMKQ8NFU5 416 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 CAGE1Q8TC20 777 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 BRI3BPQ8WY22 251 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 ATP6V0A1Q93050 837 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 VPS37BQ9H9H4 285 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 NLRC4Q9NPP4 1024 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 GJB4Q9NTQ9 266 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 ZMYND8Q9ULU4 1186 aaPredicted RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 BARX2Q9UMQ3 279 aaPredicted RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 COG5Q9UP83 839 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 ECM29Q5VYK3 1845 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 GPAA1O43292 621 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 AHCYL1O43865 530 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 PQBP1O60828 265 aaKnown RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 COBLO75128 1261 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 DGKIO75912 1065 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 CFBP00751 764 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 ATP5OP48047 213 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 NAPAP54920 295 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 CLDN10P78369 228 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 OLFM4Q6UX06 510 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 RBM12BQ8IXT5 1001 aaKnown RBP7.17□□□□□ -1.26
SMG1-217ENST00000569764 BRF1Q92994 677 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 THAP11Q96EK4 314 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 YME1L1Q96TA2 773 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 PCDHGB5Q9Y5G0 923 aa7.17□□□□□ -1.26
SMG1-217ENST00000569764 A0A0G2JLL6 359 aaPredicted RBP7.16□□□□□ -1.26
SMG1-217ENST00000569764 YDJCA8MPS7 323 aa7.16□□□□□ -1.26
SMG1-217ENST00000569764 NCAM2O15394 837 aa7.16□□□□□ -1.26
SMG1-217ENST00000569764 DNTTP04053 509 aa7.16□□□□□ -1.26
SMG1-217ENST00000569764 TPM1P09493 284 aa7.16□□□□□ -1.26
SMG1-217ENST00000569764 CLTBP09497 229 aa7.16□□□□□ -1.26
SMG1-217ENST00000569764 MTHFRP42898 656 aa7.16□□□□□ -1.26
SMG1-217ENST00000569764 SQSTM1Q13501 440 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms