RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PDZD7Q9H5P4 517 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 RSAD1Q9HA92 442 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 KMT5AQ9NQR1 393 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 TBC1D13Q9NVG8 400 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 STK17AQ9UEE5 414 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 CCDC39Q9UFE4 941 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 ODF2LQ9ULJ1 636 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 HES2Q9Y543 173 aa12.21□□□□□ -0.45
SHCBP1-207ENST00000569702 PHLPP2Q6ZVD8 1323 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 N4BP3O15049 544 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 FGF18O76093 207 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 NPTXRO95502 500 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 ITGA4P13612 1032 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 TXLNAP40222 546 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 ZNF131P52739 623 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 PLCB3Q01970 1234 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 GIT2Q14161 759 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 TIGD5Q53EQ6 642 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 GPBP1Q86WP2 473 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 TMEM161BQ8NDZ6 487 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 RASSF8Q8NHQ8 419 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 POF1BQ8WVV4 589 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 ZNF558Q96NG5 402 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 REEP2Q9BRK0 252 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 TRIM6Q9C030 488 aaPredicted RBP12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 NXF3Q9H4D5 531 aaKnown RBP12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 KANSL3Q9P2N6 904 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 GIT1Q9Y2X7 761 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 BRWD1Q9NSI6 2320 aa12.2□□□□□ -0.46
SHCBP1-207ENST00000569702 ZMYM2Q9UBW7 1377 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 A0A087X0B3 334 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 ARL5CA6NH57 179 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 SLC16A4O15374 487 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 CUTAO60888 179 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 PPM1AP35813 382 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 PBX3P40426 434 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 ALDH7A1P49419 539 aaKnown RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 SMTNP53814 917 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 BCAR1P56945 870 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 DNM1Q05193 864 aaKnown RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 BECN1Q14457 450 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 DHX8Q14562 1220 aaKnown RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 FOXD4L6Q3SYB3 417 aaPredicted RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 AXDND1Q5T1B0 1012 aaPredicted RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 ATF7IP2Q5U623 682 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 RRAGBQ5VZM2 374 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 EEF1DP3Q658K8 133 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 FOXD4L3Q6VB84 417 aaPredicted RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 ZNF280BQ86YH2 543 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 THNSL1Q8IYQ7 743 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 HACE1Q8IYU2 909 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 SLC39A11Q8N1S5 342 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 GSTCDQ8NEC7 633 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 URGCPQ8TCY9 931 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 KCNG4Q8TDN1 519 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 ACO2Q99798 780 aaKnown RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 NSUN3Q9H649 340 aaKnown RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 NRDE2Q9H7Z3 1164 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 PTPRHQ9HD43 1115 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 SPG21Q9NZD8 308 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 LARSQ9P2J5 1176 aaKnown RBP12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 RCOR1Q9UKL0 485 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 LZTS1Q9Y250 596 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 TNFSF13BQ9Y275 285 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 INPP5FQ9Y2H2 1132 aa12.19□□□□□ -0.46
SHCBP1-207ENST00000569702 ATG2AQ2TAZ0 1938 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 CARNS1A5YM72 827 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 B4GALT3O60512 393 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 DDHD2O94830 711 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 GALTP07902 379 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 MAPTP10636 758 aaKnown RBP12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 LIG1P18858 919 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 PROZP22891 400 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 AKAP5P24588 427 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 IRS1P35568 1242 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 MLH1P40692 756 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 NCKAP1LP55160 1127 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 RNASELQ05823 741 aaKnown RBP12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 TCEAL5Q5H9L2 206 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 SHC4Q6S5L8 630 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 ATXN2LQ8WWM7 1075 aaKnown RBP12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 ZFP42Q96MM3 310 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 FIZ1Q96SL8 496 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 GAD1Q99259 594 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 ADPGKQ9BRR6 497 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 MRPL4Q9BYD3 311 aaKnown RBP12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 PANK2Q9BZ23 570 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 PARVGQ9HBI0 331 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 MIOSQ9NXC5 875 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 THEGQ9P2T0 379 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 DNAJB4Q9UDY4 337 aa12.18□□□□□ -0.46
SHCBP1-207ENST00000569702 COG5Q9UP83 839 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms