RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 BLOC1S4Q9NUP1 217 aa18.37■□□□□ 0.53
EDC3-216ENST00000569561 DNAJB4Q9UDY4 337 aa18.37■□□□□ 0.53
EDC3-216ENST00000569561 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
EDC3-216ENST00000569561 USP20Q9Y2K6 914 aa18.37■□□□□ 0.53
EDC3-216ENST00000569561 GIT1Q9Y2X7 761 aa18.37■□□□□ 0.53
EDC3-216ENST00000569561 NT5C1B-RDH14C9J2C7 533 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 LINC01565O15544 149 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 ZC3H11AO75152 810 aaKnown RBP eCLIP18.36■□□□□ 0.53
EDC3-216ENST00000569561 TBX10O75333 385 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 GLP2RO95838 553 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 ITGA4P13612 1032 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 NPTX2P47972 431 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 SLC11A1P49279 550 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 DSC1Q08554 894 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 NCBP1Q09161 790 aaKnown RBP18.36■□□□□ 0.53
EDC3-216ENST00000569561 ADAM15Q13444 863 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 ARSHQ5FYA8 562 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 EEF1DP3Q658K8 133 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 PDE12Q6L8Q7 609 aaKnown RBP18.36■□□□□ 0.53
EDC3-216ENST00000569561 EFHBQ8N7U6 833 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 IGSF21Q96ID5 467 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 IFT74Q96LB3 600 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 GAD1Q99259 594 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 PLIN2Q99541 437 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 VN1R3Q9BXE9 311 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 CCSER1Q9C0I3 900 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 MIOSQ9NXC5 875 aa18.36■□□□□ 0.53
EDC3-216ENST00000569561 CARNS1A5YM72 827 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 ARL5CA6NH57 179 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 H3BQ06 376 aaPredicted RBP18.35■□□□□ 0.53
EDC3-216ENST00000569561 NPTXRO95502 500 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 PLA2G4BP0C869 781 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 MLH1P40692 756 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 EFNA5P52803 228 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 PEX3P56589 373 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 KCNC3Q14003 757 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 ZRSR1Q15695 479 aaKnown RBP18.35■□□□□ 0.53
EDC3-216ENST00000569561 DUSP6Q16828 381 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 NT5DC1Q5TFE4 455 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 HSCBQ8IWL3 235 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 URGCPQ8TCY9 931 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 KCNN1Q92952 543 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 DRC1Q96MC2 740 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 NECAB3Q96P71 396 aaPredicted RBP18.35■□□□□ 0.53
EDC3-216ENST00000569561 USP28Q96RU2 1077 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 UHRF1Q96T88 793 aaPredicted RBP18.35■□□□□ 0.53
EDC3-216ENST00000569561 TMEM175Q9BSA9 504 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 NTPCRQ9BSD7 190 aaKnown RBP18.35■□□□□ 0.53
EDC3-216ENST00000569561 ZSCAN16Q9H4T2 348 aaPredicted RBP18.35■□□□□ 0.53
EDC3-216ENST00000569561 C17orf75Q9HAS0 396 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 CLDND1Q9NY35 253 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 KCND2Q9NZV8 630 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 KANSL3Q9P2N6 904 aa18.35■□□□□ 0.53
EDC3-216ENST00000569561 SRPRBQ9Y5M8 271 aaKnown RBP18.35■□□□□ 0.53
EDC3-216ENST00000569561 PHLPP2Q6ZVD8 1323 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 N4BP3O15049 544 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 EFEMP2O95967 443 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 PLCG1P19174 1290 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 ALDH7A1P49419 539 aaKnown RBP18.34■□□□□ 0.53
EDC3-216ENST00000569561 PRPF4BQ13523 1007 aaKnown RBP18.34■□□□□ 0.53
EDC3-216ENST00000569561 USP49Q70CQ1 688 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 COLGALT2Q8IYK4 626 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 VN1R2Q8NFZ6 395 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 SPIRE2Q8WWL2 714 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 PPP2R3CQ969Q6 453 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 MSLNLQ96KJ4 702 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 ZFP42Q96MM3 310 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 TCF25Q9BQ70 676 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 ZBP1Q9H171 429 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 TMEM134Q9H6X4 195 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
EDC3-216ENST00000569561 MARCH5Q9NX47 278 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 CLEC1BQ9P126 229 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 PUF60Q9UHX1 559 aaKnown RBP18.34■□□□□ 0.53
EDC3-216ENST00000569561 NCOR1O75376 2440 aa18.34■□□□□ 0.53
EDC3-216ENST00000569561 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 HIDE1A8MVS5 230 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 ABLIM1O14639 778 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 POMCP01189 267 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 AKAP5P24588 427 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 MARCKSP29966 332 aaPredicted RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 UBA7P41226 1012 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 NRIP1P48552 1158 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 NASPP49321 788 aaPredicted RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 SCNN1GP51170 649 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 KRT17Q04695 432 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 RNASELQ05823 741 aaKnown RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 DMP1Q13316 513 aaPredicted RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 KARSQ15046 597 aaKnown RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 PLPP4Q5VZY2 271 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 DDX53Q86TM3 631 aaKnown RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.52
EDC3-216ENST00000569561 PTPRHQ9HD43 1115 aa18.33■□□□□ 0.52
EDC3-216ENST00000569561 NPHP3-ACAD11A0A0J9YXS1 232 aa18.32■□□□□ 0.52
EDC3-216ENST00000569561 PLS3P13797 630 aa18.32■□□□□ 0.52
EDC3-216ENST00000569561 SLC39A14Q15043 492 aa18.32■□□□□ 0.52
EDC3-216ENST00000569561 RBM23Q86U06 439 aaKnown RBP18.32■□□□□ 0.52
EDC3-216ENST00000569561 RNF168Q8IYW5 571 aaPredicted RBP18.32■□□□□ 0.52
EDC3-216ENST00000569561 TMEM161BQ8NDZ6 487 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms