RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 L1TD1Q5T7N2 865 aaKnown RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 CDCA2Q69YH5 1023 aaPredicted RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 APBB1IPQ7Z5R6 666 aaPredicted RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 IFNLR1Q8IU57 520 aaPredicted RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 SYCP3Q8IZU3 236 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 ARNTL2Q8WYA1 636 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 KHSRPQ92945 711 aaKnown RBP eCLIP17.61■□□□□ 0.41
USB1-215ENST00000569252 BICD1Q96G01 975 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 PRIMPOLQ96LW4 560 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 KIFC3Q9BVG8 833 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 FTHL17Q9BXU8 183 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 IFIH1Q9BYX4 1025 aaKnown RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 MTIF3Q9H2K0 278 aaKnown RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 EPHX3Q9H6B9 360 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 SLC39A2Q9NP94 309 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 KIAA1468Q9P260 1216 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 PADI3Q9ULW8 664 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 ST3GAL5Q9UNP4 418 aa17.61■□□□□ 0.41
USB1-215ENST00000569252 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
USB1-215ENST00000569252 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
USB1-215ENST00000569252 RHOBTB3O94955 611 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 PRKCBP05771 671 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 AXLP30530 894 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 CD52P31358 61 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 STIM1Q13586 685 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 CAVIN1Q6NZI2 390 aaKnown RBP17.6■□□□□ 0.41
USB1-215ENST00000569252 TMEM161BQ8NDZ6 487 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 HVCN1Q96D96 273 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 ACCSQ96QU6 501 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 MRPL4Q9BYD3 311 aaKnown RBP17.6■□□□□ 0.41
USB1-215ENST00000569252 ST6GALNAC4Q9H4F1 302 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 TMEM206Q9H813 350 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 ARHGAP28Q9P2N2 729 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 TBX20Q9UMR3 447 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 PCDHA11Q9Y5I1 949 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 MTCH2Q9Y6C9 303 aa17.6■□□□□ 0.41
USB1-215ENST00000569252 TANC1Q9C0D5 1861 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 ACKR2O00590 384 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 KLRC4O43908 158 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 MATR3P43243 847 aaKnown RBP eCLIP17.59■□□□□ 0.41
USB1-215ENST00000569252 GTF2BQ00403 316 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 MBTD1Q05BQ5 628 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 IKBKEQ14164 716 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 TCTN1Q2MV58 587 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 SASS6Q6UVJ0 657 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 ERCC4Q92889 916 aaPredicted RBP17.59■□□□□ 0.41
USB1-215ENST00000569252 TCHPQ9BT92 498 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 FZD8Q9H461 694 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 CHST12Q9NRB3 414 aa17.59■□□□□ 0.41
USB1-215ENST00000569252 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
USB1-215ENST00000569252 NBNO60934 754 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 FGFR4P22455 802 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 PPP1R2P41236 205 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 FAM187BQ17R55 369 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 PLEKHG4Q58EX7 1191 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 ZNF658Q5TYW1 1059 aaPredicted RBP17.58■□□□□ 0.4
USB1-215ENST00000569252 ISM2Q6H9L7 571 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 NOTUMQ6P988 496 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 CNKSR3Q6P9H4 555 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 TRAF7Q6Q0C0 670 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 FAM228AQ86W67 206 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 TRIML1Q8N9V2 468 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 TMEM40Q8WWA1 233 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 HPS3Q969F9 1004 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 ADPGKQ9BRR6 497 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 TRIM6Q9C030 488 aaPredicted RBP17.58■□□□□ 0.4
USB1-215ENST00000569252 MINDY3Q9H8M7 445 aa17.58■□□□□ 0.4
USB1-215ENST00000569252 PIN4Q9Y237 131 aaKnown RBP17.58■□□□□ 0.4
USB1-215ENST00000569252 FAM86C2PA6NEL3 165 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 BIN1O00499 593 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 EIF3DO15371 548 aaKnown RBP eCLIP17.57■□□□□ 0.4
USB1-215ENST00000569252 EFCAB14O75071 495 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 CXCL10P02778 98 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 MYBP10242 640 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 SKIP12755 728 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 SARSP49591 514 aaKnown RBP17.57■□□□□ 0.4
USB1-215ENST00000569252 LIG4P49917 911 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 TAP1Q03518 808 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 STK4Q13043 487 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 ZC2HC1CQ53FD0 456 aaPredicted RBP17.57■□□□□ 0.4
USB1-215ENST00000569252 NT5DC1Q5TFE4 455 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 TWF2Q6IBS0 349 aaKnown RBP17.57■□□□□ 0.4
USB1-215ENST00000569252 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 MYOCDQ8IZQ8 938 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 DBF4BQ8NFT6 615 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 SPATA20Q8TB22 786 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 AGO3Q9H9G7 860 aaKnown RBP17.57■□□□□ 0.4
USB1-215ENST00000569252 ERVK-5Q9HDB9 667 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 MAN1B1Q9UKM7 699 aa17.57■□□□□ 0.4
USB1-215ENST00000569252 UBE4BO95155 1302 aa17.56■□□□□ 0.4
USB1-215ENST00000569252 HNRNPDLO14979 420 aaKnown RBP17.56■□□□□ 0.4
USB1-215ENST00000569252 N4BP3O15049 544 aa17.56■□□□□ 0.4
USB1-215ENST00000569252 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
USB1-215ENST00000569252 PLA2G5P39877 138 aa17.56■□□□□ 0.4
USB1-215ENST00000569252 MBTPS1Q14703 1052 aa17.56■□□□□ 0.4
USB1-215ENST00000569252 ATF7IP2Q5U623 682 aa17.56■□□□□ 0.4
USB1-215ENST00000569252 HS2ST1Q7LGA3 356 aa17.56■□□□□ 0.4
USB1-215ENST00000569252 HACE1Q8IYU2 909 aa17.56■□□□□ 0.4
USB1-215ENST00000569252 ZNF507Q8TCN5 953 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms