RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	ZNF366	Q8N895	744 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	CDYL2	Q8N8U2	506 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	SMG7	Q92540	1137 aa	Known RBP	5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	RTF1	Q92541	710 aa	Known RBP	5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	HS3ST4	Q9Y661	456 aa		5.01	□□□□□ -1.61
UBR1-209	ENST00000569243	ALDH1A2	O94788	518 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	SEC24D	O94855	1032 aa	Predicted RBP	5	□□□□□ -1.61
UBR1-209	ENST00000569243	LCE1E	Q5T753	118 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	TAS1R1	Q7RTX1	841 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	GRASP	Q7Z6J2	395 aa	Predicted RBP	5	□□□□□ -1.61
UBR1-209	ENST00000569243	FAM83A	Q86UY5	434 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	HOMER1	Q86YM7	354 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	PGBD4	Q96DM1	585 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	MTFR1L	Q9H019	292 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	ZSWIM4	Q9H7M6	989 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	NUMBL	Q9Y6R0	609 aa		5	□□□□□ -1.61
UBR1-209	ENST00000569243	APOL3	O95236	402 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	PFKM	P08237	780 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	PTH2R	P49190	550 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	MRPL49	Q13405	166 aa	Known RBP	4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	C16orf86	Q6ZW13	317 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	LRRTM3	Q86VH5	581 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	AHI1	Q8N157	1196 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	ZNF610	Q8N9Z0	462 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	OR52N2	Q8NGI0	321 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	WASF1	Q92558	559 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	UBXN4	Q92575	508 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	NINJ1	Q92982	152 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	ZNF496	Q96IT1	587 aa	Predicted RBP	4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	KRTAP2-2	Q9BYT5	123 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	KANSL2	Q9H9L4	492 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	NCDN	Q9UBB6	729 aa		4.99	□□□□□ -1.61
UBR1-209	ENST00000569243	ST20-MTHFS	A0A0A6YYL1	179 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	GAGE12B	A1L429	117 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	GAGE12H	A6NDE8	117 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	ELL2	O00472	640 aa	Predicted RBP	4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	DNAJC6	O75061	913 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	GYPE	P15421	78 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	XPA	P23025	273 aa	Predicted RBP	4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	NRG3	P56975	720 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	MEF2A	Q02078	507 aa	Predicted RBP	4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	CD69	Q07108	199 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	PLEKHG4	Q58EX7	1191 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	PPM1K	Q8N3J5	372 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	MB21D1	Q8N884	522 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	IL17RA	Q96F46	866 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	DRC1	Q96MC2	740 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	DCLRE1C	Q96SD1	692 aa	Known RBP	4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	SLC46A2	Q9BY10	475 aa		4.98	□□□□□ -1.61
UBR1-209	ENST00000569243	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
UBR1-209	ENST00000569243		A0A1W2PR48	441 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	FAM83G	A6ND36	823 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	ZNF185	O15231	689 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	TGM5	O43548	720 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	PCDH8	O95206	1070 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	LY86	O95711	162 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	LSP1	P33241	339 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	GZMK	P49863	264 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	NEK4	P51957	841 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	KPNA1	P52294	538 aa	Predicted RBP	4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	VPS72	Q15906	364 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	CCDC144B	Q3MJ40	725 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	PRR16	Q569H4	304 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	GPRIN1	Q7Z2K8	1008 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	SMC1B	Q8NDV3	1235 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	PIK3C3	Q8NEB9	887 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	OR5M3	Q8NGP4	307 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	GAB3	Q8WWW8	586 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	MYEOV	Q96EZ4	313 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	PAWR	Q96IZ0	340 aa	Known RBP	4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	RNPC3	Q96LT9	517 aa	Known RBP	4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	NDC1	Q9BTX1	674 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	KCNH6	Q9H252	994 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	ING3	Q9NXR8	418 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	KCNG1	Q9UIX4	513 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	MSRA	Q9UJ68	235 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	INSL6	Q9Y581	213 aa		4.97	□□□□□ -1.61
UBR1-209	ENST00000569243	DIRC3	C9JPN6	131 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	STC2	O76061	302 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	HOXB6	P17509	224 aa	Known RBP	4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	LSS	P48449	732 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	SCNN1B	P51168	640 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	TIGD2	Q4W5G0	525 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	C19orf54	Q5BKX5	351 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243		Q6YL49	198 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	FRMD7	Q6ZUT3	714 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	GLB1L2	Q8IW92	636 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	CPT1C	Q8TCG5	803 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	CHTF18	Q8WVB6	975 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	FERMT2	Q96AC1	680 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	SLC29A3	Q9BZD2	475 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	SORCS3	Q9UPU3	1222 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	PLAA	Q9Y263	795 aa		4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	COL11A2	P13942	1736 aa	Predicted RBP	4.96	□□□□□ -1.62
UBR1-209	ENST00000569243	COL3A1	P02461	1466 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	KPNA6	O60684	536 aa		4.95	□□□□□ -1.62

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