RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SH2D3CQ8N5H7 860 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 GPR156Q8NFN8 814 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 CCHCR1Q8TD31 782 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 TBCBQ99426 244 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 PCGF6Q9BYE7 350 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 KIAA1683Q9H0B3 1180 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 EPB41L4BQ9H329 900 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 KLHL11Q9NVR0 708 aa7.23□□□□□ -1.25
UBR1-208ENST00000569066 MAFO75444 373 aaPredicted RBP7.22□□□□□ -1.25
UBR1-208ENST00000569066 HRGP04196 525 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 PFKLP17858 780 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 TRAPPC10P48553 1259 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 ZNF280AP59817 542 aaPredicted RBP7.22□□□□□ -1.25
UBR1-208ENST00000569066 ADAM15Q13444 863 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 TMEM132EQ6IEE7 984 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 TRMT10BQ6PF06 316 aaKnown RBP7.22□□□□□ -1.25
UBR1-208ENST00000569066 ZDHHC14Q8IZN3 488 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 LINC00482Q8N8I6 264 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 NUDT10Q8NFP7 164 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 ZNF526Q8TF50 670 aaPredicted RBP7.22□□□□□ -1.25
UBR1-208ENST00000569066 NUDT11Q96G61 164 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 ATP6V0A4Q9HBG4 840 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 PCDHA3Q9Y5H8 950 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
UBR1-208ENST00000569066 SAFB2Q14151 953 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBR1-208ENST00000569066 RNF220Q5VTB9 566 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 DPP8Q6V1X1 898 aaPredicted RBP7.22□□□□□ -1.25
UBR1-208ENST00000569066 DRC7Q8IY82 874 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 NSUN6Q8TEA1 469 aaKnown RBP7.22□□□□□ -1.25
UBR1-208ENST00000569066 GJA10Q969M2 543 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 C22orf23Q9BZE7 217 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 RPTORQ8N122 1335 aa7.22□□□□□ -1.25
UBR1-208ENST00000569066 CAPN8A6NHC0 703 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 EIF3JO75822 258 aaKnown RBP7.21□□□□□ -1.25
UBR1-208ENST00000569066 KLHL18O94889 574 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 HMGCRP04035 888 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 RRADP55042 308 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 FAM193AP78312 1265 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 NOGQ13253 232 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 LILRA3Q8N6C8 439 aaPredicted RBP7.21□□□□□ -1.25
UBR1-208ENST00000569066 REPS2Q8NFH8 660 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 C14orf93Q9H972 538 aaKnown RBP7.21□□□□□ -1.25
UBR1-208ENST00000569066 PUF60Q9UHX1 559 aaKnown RBP7.21□□□□□ -1.25
UBR1-208ENST00000569066 DMTF1Q9Y222 760 aa7.21□□□□□ -1.25
UBR1-208ENST00000569066 MAFGO15525 162 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 FPR1P21462 350 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 EIF4HQ15056 248 aaKnown RBP7.21□□□□□ -1.26
UBR1-208ENST00000569066 VPS72Q15906 364 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 PRR31Q5SQ13 230 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 DARS2Q6PI48 645 aaKnown RBP7.21□□□□□ -1.26
UBR1-208ENST00000569066 APOA5Q6Q788 366 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 CXXC5Q7LFL8 322 aaKnown RBP7.21□□□□□ -1.26
UBR1-208ENST00000569066 SLC35A4Q96G79 324 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 SAMD11Q96NU1 681 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 TDP1Q9NUW8 608 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 ING3Q9NXR8 418 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 FAM184BQ9ULE4 1060 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 CORO2BQ9UQ03 480 aa7.21□□□□□ -1.26
UBR1-208ENST00000569066 CFAP69A5D8W1 941 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 BIN1O00499 593 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 KPNA5O15131 536 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 AMY1AP04745 511 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 ITGB5P18084 799 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 ECHS1P30084 290 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 PIK3CBP42338 1070 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 HTR3AP46098 478 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 PRIM2P49643 509 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 MLANAQ16655 118 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 MAEAQ7L5Y9 396 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 SNX33Q8WV41 574 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 STON2Q8WXE9 905 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 CLPTM1LQ96KA5 538 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 ZFP64Q9NPA5 681 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.2□□□□□ -1.26
UBR1-208ENST00000569066 CFAP20Q9Y6A4 193 aaKnown RBP7.2□□□□□ -1.26
UBR1-208ENST00000569066 PEX10O60683 326 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 TOP3AQ13472 1001 aaPredicted RBP7.2□□□□□ -1.26
UBR1-208ENST00000569066 GPR155Q7Z3F1 870 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 LRTOMTQ8WZ04 291 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 TMX3Q96JJ7 454 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 SPATA25Q9BR10 227 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 ABCF2Q9UG63 623 aa7.2□□□□□ -1.26
UBR1-208ENST00000569066 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 IFRD1O00458 451 aaPredicted RBP7.19□□□□□ -1.26
UBR1-208ENST00000569066 GOLIM4O00461 696 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 LTA4HP09960 611 aaKnown RBP7.19□□□□□ -1.26
UBR1-208ENST00000569066 ZNF888P0CJ79 500 aaPredicted RBP7.19□□□□□ -1.26
UBR1-208ENST00000569066 PCSK1P29120 753 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 IL13P35225 146 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 TM4SF4P48230 202 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 AK2P54819 239 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 GJA9P57773 515 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 CDC42EP1Q00587 391 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 DHX8Q14562 1220 aaKnown RBP7.19□□□□□ -1.26
UBR1-208ENST00000569066 PLS1Q14651 629 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 KHDC1Q4VXA5 237 aaKnown RBP7.19□□□□□ -1.26
UBR1-208ENST00000569066 TTC7BQ86TV6 843 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 TMEFF1Q8IYR6 380 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 ADGRG2Q8IZP9 1017 aa7.19□□□□□ -1.26
UBR1-208ENST00000569066 TNIP3Q96KP6 325 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms