RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	DNAJB1	P25685	340 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	IRS1	P35568	1242 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	TXLNA	P40222	546 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	PBX3	P40426	434 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	ERVFC1	P60507	584 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	ADAM15	Q13444	863 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	CAMK1	Q14012	370 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	FAM187B	Q17R55	369 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	PPP4R3CP	Q6ZMV5	832 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	AGMO	Q6ZNB7	445 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	VPS52	Q8N1B4	723 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	SLC39A11	Q8N1S5	342 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	NRDE2	Q9H7Z3	1164 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	KCND2	Q9NZV8	630 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	HCST	Q9UBK5	93 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	PRKAG3	Q9UGI9	489 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	SSX2IP	Q9Y2D8	614 aa		11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	RBM19	Q9Y4C8	960 aa	Known RBP	11.44	□□□□□ -0.58
UBR1-207	ENST00000568782	GRXCR2	A6NFK2	248 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	ARL5C	A6NH57	179 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782		H0YCG3	227 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	ACKR2	O00590	384 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	PER2	O15055	1255 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	GALT	P07902	379 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	CDC25A	P30304	524 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	LONP1	P36776	959 aa	Known RBP	11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	OR1G1	P47890	313 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	STRN3	Q13033	797 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	CLUL1	Q15846	466 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	CTC1	Q2NKJ3	1217 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	DCAF4L1	Q3SXM0	396 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	ELMSAN1	Q6PJG2	1045 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	ADGRD2	Q7Z7M1	963 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	DDX53	Q86TM3	631 aa	Known RBP	11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	CABP7	Q86V35	215 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	IGSF21	Q96ID5	467 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	GAD1	Q99259	594 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	TCHP	Q9BT92	498 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	COLEC11	Q9BWP8	271 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	EIF2A	Q9BY44	585 aa	Known RBP	11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	FZD8	Q9H461	694 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	KMT5A	Q9NQR1	393 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	CCDC39	Q9UFE4	941 aa		11.43	□□□□□ -0.58
UBR1-207	ENST00000568782	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	MEIS3P2	A8K0S8	358 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	PP2D1	A8MPX8	630 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	B4GALT5	O43286	388 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	HIP1R	O75146	1068 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	KRT18	P05783	430 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	IL9	P15248	144 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	SYT1	P21579	422 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	MLH1	P40692	756 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	YARS	P54577	528 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	PEX3	P56589	373 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	SMAD4	Q13485	552 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	COL19A1	Q14993	1142 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	SF3A1	Q15459	793 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	ECM1	Q16610	540 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	DUSP6	Q16828	381 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	TPRN	Q4KMQ1	711 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	UBXN11	Q5T124	520 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	KIAA1841	Q6NSI8	718 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	CES5A	Q6NT32	575 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	RINT1	Q6NUQ1	792 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	PPFIBP1	Q86W92	1011 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	GJD3	Q8N144	294 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	MRPL43	Q8N983	215 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	SMG8	Q8ND04	991 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	CASP10	Q92851	521 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	PLIN2	Q99541	437 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	EMILIN2	Q9BXX0	1053 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	MRPL17	Q9NRX2	175 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	LARS	Q9P2J5	1176 aa	Known RBP	11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	DPP7	Q9UHL4	492 aa		11.42	□□□□□ -0.58
UBR1-207	ENST00000568782	ZMYM2	Q9UBW7	1377 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	NRP1	O14786	923 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	FSCN2	O14926	492 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	MBTPS2	O43462	519 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	UROD	P06132	367 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	PLA2G4B	P0C869	781 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	HOXB8	P17481	243 aa	Predicted RBP	11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	AKAP5	P24588	427 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	GUCY2C	P25092	1073 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	LTBR	P36941	435 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	MATR3	P43243	847 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	SLC11A1	P49279	550 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	GRIK3	Q13003	919 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	IL17A	Q16552	155 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	AMHR2	Q16671	573 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	HYI	Q5T013	277 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	ATF7IP2	Q5U623	682 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	LLGL2	Q6P1M3	1020 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	CDR2L	Q86X02	465 aa	Predicted RBP	11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	ZNF280B	Q86YH2	543 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	FAM178B	Q8IXR5	827 aa		11.41	□□□□□ -0.58
UBR1-207	ENST00000568782	SYT2	Q8N9I0	419 aa	Predicted RBP	11.41	□□□□□ -0.58

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