RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 GYPCP04921 128 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 AKR1A1P14550 325 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 PPM1FP49593 454 aaPredicted RBP13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 GPC3P51654 580 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 KIF11P52732 1056 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 LACTBP83111 547 aaPredicted RBP13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 FSTL1Q12841 308 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 ATF7IP2Q5U623 682 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 CBWD2Q8IUF1 395 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 MSANTD4Q8NCY6 345 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 TLR2O60603 784 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 ICAM3P32942 547 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 TRAF3IP3Q9Y228 551 aa13.12□□□□□ -0.31
TMEM170A-205ENST00000568559 CTAGE15A4D2H0 777 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 DHX15O43143 795 aaKnown RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 TOMM70O94826 608 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 LYPLA2O95372 231 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 CTAGE8P0CG41 777 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 TNNC1P63316 161 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 CTAGE6Q86UF2 777 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 CTAGE4Q8IX94 777 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 TC2NQ8N9U0 490 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 FBXL13Q8NEE6 735 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 MAML3Q96JK9 1138 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 FGFBP2Q9BYJ0 223 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 RABEP2Q9H5N1 569 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 PIN4Q9Y237 131 aaKnown RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 RGPD3A6NKT7 1758 aaPredicted RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 RGPD4Q7Z3J3 1758 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 URB1O60287 2271 aaKnown RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 FLT3LGP49771 235 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 CRHR2Q13324 411 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 MTF1Q14872 753 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 GPAT2Q6NUI2 795 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 CCDC25Q86WR0 208 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 PRMT7Q9NVM4 692 aaPredicted RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 WRAP73Q9P2S5 460 aaPredicted RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 ADAMTS5Q9UNA0 930 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 SLC45A1Q9Y2W3 748 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 ITIH6Q6UXX5 1313 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 KIAA1551Q9HCM1 1747 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 TISP43B9A030 160 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 XPOTO43592 962 aaKnown RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 ATF7P17544 494 aaPredicted RBP13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 LIN9Q5TKA1 542 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 APBA2Q99767 749 aa13.11□□□□□ -0.31
TMEM170A-205ENST00000568559 A0A087WZ62 844 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 ZNF862O60290 1169 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 SNRPFP62306 86 aaKnown RBP13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 GRIK4Q16099 956 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 SPIRE2Q8WWL2 714 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 IFT81Q8WYA0 676 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 CHP1Q99653 195 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 GPR20Q99678 358 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 FDXACB1Q9BRP7 624 aaPredicted RBP13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 SELENOOQ9BVL4 669 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 PDE11AQ9HCR9 933 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 TOPORSQ9NS56 1045 aaPredicted RBP13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 LAMB1P07942 1786 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 C17orf102A2RUQ5 167 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 SPOPO43791 374 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 MAPTP10636 758 aaKnown RBP13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 BPIFB4P59827 614 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 SP2Q02086 613 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 ERGIC2Q96RQ1 377 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 CDC42EP1Q00587 391 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 CKAP4Q07065 602 aaKnown RBP13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 TMCO3Q6UWJ1 677 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 RNF180Q86T96 592 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 ABRAQ8N0Z2 381 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 NUB1Q9Y5A7 615 aa13.1□□□□□ -0.31
TMEM170A-205ENST00000568559 UCHL3P15374 230 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 PLCB4Q15147 1175 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 MTERF4Q7Z6M4 381 aaKnown RBP13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 SYNJ2BP-COX16A0A087WUM0 186 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 EXTL3O43909 919 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 CCZ1BP86790 482 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 FSCN1Q16658 493 aaKnown RBP13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 COX16Q9P0S2 106 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 ADAMTSL1Q8N6G6 1762 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 THAP12O43422 761 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 CA12O43570 354 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 ABL1P00519 1130 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 MRPS25P82663 173 aaKnown RBP13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 DUSP28Q4G0W2 176 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 PDXDC1Q6P996 788 aa13.09□□□□□ -0.31
TMEM170A-205ENST00000568559 PLPPR4Q7Z2D5 763 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms