RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 MAGED2Q9UNF1 606 aaPredicted RBP11.3□□□□□ -0.6
FANCA-230ENST00000568369 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 PPFIA2O75334 1257 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 SATB1Q01826 763 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 TRMT10CQ7L0Y3 403 aaKnown RBP11.3□□□□□ -0.6
FANCA-230ENST00000568369 PPM1NQ8N819 430 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
FANCA-230ENST00000568369 REEP2Q9BRK0 252 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 TRIM51Q9BSJ1 452 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
FANCA-230ENST00000568369 ARL2BPQ9Y2Y0 163 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 CYP26A1O43174 497 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 PHF2O75151 1096 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 ERVK-24P63145 666 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 PLCB4Q15147 1175 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 SYDE1Q6ZW31 735 aaPredicted RBP11.3□□□□□ -0.6
FANCA-230ENST00000568369 USP38Q8NB14 1042 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 UPF3AQ9H1J1 476 aaKnown RBP11.3□□□□□ -0.6
FANCA-230ENST00000568369 RAVER2Q9HCJ3 691 aaKnown RBP11.3□□□□□ -0.6
FANCA-230ENST00000568369 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 L1RE1Q9UN81 338 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 HEY1Q9Y5J3 304 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 OVOS2A0A0G2JMS6 1433 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 PITPNM2Q9BZ72 1349 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 NRXN1Q9ULB1 1477 aa11.3□□□□□ -0.6
FANCA-230ENST00000568369 NPHP3-ACAD11A0A0J9YXS1 232 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 SETSIPP0DME0 302 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 SLC9A1P19634 815 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 MX2P20592 715 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 GPSM2P81274 684 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 STXBP2Q15833 593 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 TAF1BQ53T94 588 aaPredicted RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 CIAPIN1Q6FI81 312 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 SPATA21Q7Z572 469 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 GPD1LQ8N335 351 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 PNKPQ96T60 521 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 ISCUQ9H1K1 167 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 DDX56Q9NY93 547 aaKnown RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 GABBR1Q9UBS5 961 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 SLC9A2Q9UBY0 812 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 FLT1P17948 1338 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 ESYT2A0FGR8 921 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 RASA1P20936 1047 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.63e-6■□□□□ 9.9
FANCA-230ENST00000568369 DEUP1Q05D60 604 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 FSCBQ5H9T9 825 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 TRAPPC11Q7Z392 1133 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 RTKN2Q8IZC4 609 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 VPS39Q96JC1 886 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 FIS1Q9Y3D6 152 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 TCP11X1B4DZS4 312 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 MARK3P27448 753 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 ARL13BQ3SXY8 428 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 HIPK4Q8NE63 616 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 OR6B3Q8NGW1 331 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 PSPC1Q8WXF1 523 aaKnown RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 FAM193BQ96PV7 902 aaPredicted RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 HERC5Q9UII4 1024 aaKnown RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 TTC36A6NLP5 189 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 CHN1P15882 459 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 ITIH2P19823 946 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 KLK7P49862 253 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 PSMC1P62191 440 aaKnown RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
FANCA-230ENST00000568369 ATP6V1E2Q96A05 226 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 MTRQ99707 1265 aa11.29□□□□□ -0.6
FANCA-230ENST00000568369 LPXNO60711 386 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 PDHBP11177 359 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 CD44P16070 742 aaKnown RBP11.28□□□□□ -0.6
FANCA-230ENST00000568369 SDC4P31431 198 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 C1orf146Q5VVC0 180 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 FBXW10Q5XX13 1052 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 METTL23Q86XA0 190 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 PIP4K2CQ8TBX8 421 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 MKNK1Q9BUB5 465 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 PARVAQ9NVD7 372 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 FBXO40Q9UH90 709 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 FAM107AO95990 144 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 TMEM253P0C7T8 217 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 ZNF568Q3ZCX4 644 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 FIGNQ5HY92 759 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 SLC27A3Q5K4L6 730 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 TSPYL2Q9H2G4 693 aaPredicted RBP11.28□□□□□ -0.6
FANCA-230ENST00000568369 KPNA7A9QM74 516 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 OSBPP22059 807 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 ARSEP51690 589 aa11.28□□□□□ -0.6
FANCA-230ENST00000568369 BCAR1P56945 870 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms