RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ERLIN2O94905 339 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 HSP90AA1P07900 732 aaKnown RBP10.52□□□□□ -0.73
SF3B3-211ENST00000568291 PDCP20941 246 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 MRE11P49959 708 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 UBE3AQ05086 875 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 TFDP1Q14186 410 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 MXD4Q14582 209 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-211ENST00000568291 KARSQ15046 597 aaKnown RBP10.52□□□□□ -0.73
SF3B3-211ENST00000568291 AMHR2Q16671 573 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 AGMOQ6ZNB7 445 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 BRAPQ7Z569 592 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 CABP7Q86V35 215 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 ABI1Q8IZP0 508 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 SMG8Q8ND04 991 aaKnown RBP10.52□□□□□ -0.73
SF3B3-211ENST00000568291 INTS4Q96HW7 963 aaKnown RBP10.52□□□□□ -0.73
SF3B3-211ENST00000568291 EPSTI1Q96J88 318 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 CHAMP1Q96JM3 812 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 MFSD14AQ96MC6 490 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 PANK2Q9BZ23 570 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 TMEM117Q9H0C3 514 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 ELAC1Q9H777 363 aaKnown RBP10.52□□□□□ -0.73
SF3B3-211ENST00000568291 TLE6Q9H808 572 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 CHST12Q9NRB3 414 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 DACT1Q9NYF0 836 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-211ENST00000568291 CACNA1HO95180 2353 aa10.52□□□□□ -0.73
SF3B3-211ENST00000568291 FSD2A1L4K1 749 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 TMEM221A6NGB7 291 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 LOC730098B7Z3J9 87 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 M0R296 226 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
SF3B3-211ENST00000568291 HIP1RO75146 1068 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 OFD1O75665 1012 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 FGF18O76093 207 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 NPTXRO95502 500 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 POMCP01189 267 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 ARF4P18085 180 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-211ENST00000568291 LAG3P18627 525 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 AKAP5P24588 427 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 ERVFC1P60507 584 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 RBM10P98175 930 aaKnown RBP10.51□□□□□ -0.73
SF3B3-211ENST00000568291 PTPAQ15257 358 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 PLPP4Q5VZY2 271 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 RINT1Q6NUQ1 792 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 FAM43BQ6ZT52 329 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-211ENST00000568291 ZNF280BQ86YH2 543 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 DAW1Q8N136 415 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 MCPH1Q8NEM0 835 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 VN1R2Q8NFZ6 395 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 MICAL1Q8TDZ2 1067 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 RABGGTAQ92696 567 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 EDAQ92838 391 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 USP28Q96RU2 1077 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 RAB34Q9BZG1 259 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 CSRNP2Q9H175 543 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 CXCL16Q9H2A7 254 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 KLK14Q9P0G3 267 aa10.51□□□□□ -0.73
SF3B3-211ENST00000568291 MYO10Q9HD67 2058 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 CCDC169A6NNP5 214 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 FSCN2O14926 492 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 PER2O15055 1255 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 ZC3H11AO75152 810 aaKnown RBP eCLIP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 EOMESO95936 686 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 PLA2G4BP0C869 781 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 UBA7P41226 1012 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 PEX3P56589 373 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 CBX2Q14781 532 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 DUSP6Q16828 381 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 TMEM132AQ24JP5 1023 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 EEF1DP3Q658K8 133 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 KCNT2Q6UVM3 1135 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 C1orf186Q6ZWK4 172 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 TMEM173Q86WV6 379 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 DEPTORQ8TB45 409 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 BCL7CQ8WUZ0 217 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 CDK5RAP3Q96JB5 506 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 CDCA3Q99618 268 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 PHF7Q9BWX1 381 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 NXF3Q9H4D5 531 aaKnown RBP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 TBC1D13Q9NVG8 400 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 MIOSQ9NXC5 875 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 CACNG4Q9UBN1 327 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 DNAJB4Q9UDY4 337 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 FBXO2Q9UK22 296 aaPredicted RBP10.5□□□□□ -0.73
SF3B3-211ENST00000568291 IPPQ9Y573 584 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 DENND4AQ7Z401 1863 aa10.5□□□□□ -0.73
SF3B3-211ENST00000568291 F8W810 466 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 SLC16A4O15374 487 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 ZNF623O75123 536 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 DDHD2O94830 711 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 ITGA4P13612 1032 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 NPTX2P47972 431 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 BCAR1P56945 870 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 ZXDAP98168 799 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 RNASELQ05823 741 aaKnown RBP10.49□□□□□ -0.73
SF3B3-211ENST00000568291 MAPK7Q13164 816 aa10.49□□□□□ -0.73
SF3B3-211ENST00000568291 MCM6Q14566 821 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms