RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PCDH18Q9HCL0 1135 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 IL1RAPL2Q9NP60 686 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 ZNF277Q9NRM2 450 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 SNTG2Q9NY99 539 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 PGAP2Q9UHJ9 254 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 PFDN2Q9UHV9 154 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 ZBTB1Q9Y2K1 713 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 CYP46A1Q9Y6A2 500 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 TRAF5O00463 557 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 MAFKO60675 156 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 MSCO60682 206 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 TRIM13O60858 407 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 CYP2C8P10632 490 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 MSNP26038 577 aaKnown RBP6.16□□□□□ -1.42
CAPN3-217ENST00000567817 TERF1P54274 439 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 EIF5P55010 431 aaKnown RBP6.16□□□□□ -1.42
CAPN3-217ENST00000567817 GPR85P60893 370 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 LONRF2Q1L5Z9 754 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 VWA3BQ502W6 1294 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 STEAP3Q658P3 488 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 RGMBQ6NW40 437 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 CAVIN1Q6NZI2 390 aaKnown RBP6.16□□□□□ -1.42
CAPN3-217ENST00000567817 FBXO46Q6PJ61 603 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-217ENST00000567817 LBX2Q6XYB7 198 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 AACSQ86V21 672 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 ZC3H18Q86VM9 953 aaKnown RBP6.16□□□□□ -1.42
CAPN3-217ENST00000567817 SCUBE1Q8IWY4 988 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 FAM126BQ8IXS8 530 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 SP8Q8IXZ3 490 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.16□□□□□ -1.42
CAPN3-217ENST00000567817 PHOSPHO1Q8TCT1 267 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 TTC14Q96N46 770 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 KCNC2Q96PR1 638 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 NGRNQ9NPE2 291 aaKnown RBP6.16□□□□□ -1.42
CAPN3-217ENST00000567817 SMC3Q9UQE7 1217 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 SNX14Q9Y5W7 946 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 CCDC171Q6TFL3 1326 aa6.16□□□□□ -1.42
CAPN3-217ENST00000567817 TRBV23-1A0A0A0MS06 115 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 FFAR3O14843 346 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 STX6O43752 255 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 TADA3O75528 432 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 C8BP07358 591 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 BMP7P18075 431 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 GRK2P25098 689 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 GRK3P35626 688 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 IL6STP40189 918 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 HUNKP57058 714 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 UBE2HP62256 183 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 SUMO1P63165 101 aaKnown RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 GCKRQ14397 625 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 RABL6Q3YEC7 729 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 ZC3H12BQ5HYM0 836 aaKnown RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 TSHZ3Q63HK5 1081 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 TBC1D9BQ66K14 1250 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 KCNT2Q6UVM3 1135 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 CWC27Q6UX04 472 aaKnown RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 CLEC4GQ6UXB4 293 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 TTLL10Q6ZVT0 673 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 RUFY3Q7L099 469 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 MAMDC2Q7Z304 686 aaPredicted RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 GAS2L3Q86XJ1 694 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 IFNL3Q8IZI9 196 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 SYNE4Q8N205 404 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 PDLIM2Q96JY6 352 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 CDC6Q99741 560 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 PANK2Q9BZ23 570 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 LUC7LQ9NQ29 371 aaKnown RBP6.15□□□□□ -1.42
CAPN3-217ENST00000567817 PDRG1Q9NUG6 133 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 RNF186Q9NXI6 227 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 GPRC5DQ9NZD1 345 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 HDAC9Q9UKV0 1011 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 ZDHHC9Q9Y397 364 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 KIF3AQ9Y496 699 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 PCDHB4Q9Y5E5 795 aa6.15□□□□□ -1.42
CAPN3-217ENST00000567817 SNED1Q8TER0 1413 aa6.15□□□□□ -1.43
CAPN3-217ENST00000567817 SCN11AQ9UI33 1791 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 KRIT1O00522 736 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 KCNQ3O43525 872 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 TPM3P06753 285 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 TPM2P07951 284 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 INHBBP09529 407 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 ATP5JP18859 108 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 EPS15P42566 896 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 KCNJ4P48050 445 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 AK2P54819 239 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 PKP1Q13835 747 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 NECTIN1Q15223 517 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 CCDC183Q5T5S1 534 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 NIM1KQ8IY84 436 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 C2orf69Q8N8R5 385 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 SLC17A8Q8NDX2 589 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 PLBD2Q8NHP8 589 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 GPT2Q8TD30 523 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 MAP4K1Q92918 833 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 DDX11Q96FC9 970 aa6.14□□□□□ -1.43
CAPN3-217ENST00000567817 SRPK1Q96SB4 655 aaKnown RBP6.14□□□□□ -1.43
CAPN3-217ENST00000567817 FSD1Q9BTV5 496 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms