RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RNASELQ05823 741 aaKnown RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 ZP2Q05996 745 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 MBTD1Q05BQ5 628 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 COASYQ13057 564 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 CAPSQ13938 189 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 PDIA5Q14554 519 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 SMC1AQ14683 1233 aaKnown RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 BMS1Q14692 1282 aaKnown RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 CLUL1Q15846 466 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 DUSP6Q16828 381 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 UBXN11Q5T124 520 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 PLPP4Q5VZY2 271 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 TMEM184AQ6ZMB5 413 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 TMC7Q7Z402 723 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 MRPL10Q7Z7H8 261 aaKnown RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 RBM23Q86U06 439 aaKnown RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 ADHFE1Q8IWW8 467 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 HACE1Q8IYU2 909 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 GJD3Q8N144 294 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 SLC39A11Q8N1S5 342 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 C4orf32Q8N8J7 132 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 IGSF22Q8N9C0 903 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 SMRP1Q8NCR6 262 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 ASAP3Q8TDY4 903 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 LPPQ93052 612 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 TMEM169Q96HH4 297 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 TMX3Q96JJ7 454 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 MSLNLQ96KJ4 702 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 PRIMPOLQ96LW4 560 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 TBC1D32Q96NH3 1257 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 POP1Q99575 1024 aaKnown RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 C1QTNF1Q9BXJ1 281 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 RAB34Q9BZG1 259 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 CSRNP2Q9H175 543 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 POLR3FQ9H1D9 316 aaPredicted RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 NRDE2Q9H7Z3 1164 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 RSAD1Q9HA92 442 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 TBC1D13Q9NVG8 400 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 KANSL3Q9P2N6 904 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 STK39Q9UEW8 545 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 LRWD1Q9UFC0 647 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 INPP5FQ9Y2H2 1132 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 PCDHGC5Q9Y5F6 944 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 MYH15Q9Y2K3 1946 aa5.31□□□□□ -1.56
CLK3-219ENST00000567805 MTCL1Q9Y4B5 1905 aaKnown RBP5.31□□□□□ -1.56
CLK3-219ENST00000567805 PLXNA3P51805 1871 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 DENND4AQ7Z401 1863 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 ZMYM2Q9UBW7 1377 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 CITO14578 2027 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 C2orf16Q68DN1 1984 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 A0A087WWV3 80 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 ARHGEF35A5YM69 484 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 LRRIQ4A6NIV6 560 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 HIDE1A8MVS5 230 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 NT5C1B-RDH14C9J2C7 533 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 PI4K2BG5E9Z4 385 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 H3BQV1 296 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 PER2O15055 1255 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 INPPL1O15357 1258 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 CD2BP2O95400 341 aaKnown RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 GALTP07902 379 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 ITGA4P13612 1032 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 ARF4P18085 180 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 CYP11B2P19099 503 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 GJB2P29033 226 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 SSTR3P32745 418 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 CCT6AP40227 531 aaKnown RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 PRPHP41219 470 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 PTGDRQ13258 359 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 KCNC3Q14003 757 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 GIT2Q14161 759 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 PPP2R5AQ15172 486 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 AMHR2Q16671 573 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 FAM187BQ17R55 369 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 RILPL1Q5EBL4 403 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 CDCA2Q69YH5 1023 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 MCTP1Q6DN14 999 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 SLC27A1Q6PCB7 646 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 PADI6Q6TGC4 694 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 DTHD1Q6ZMT9 781 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 AGMOQ6ZNB7 445 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 MAEAQ7L5Y9 396 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 DDX53Q86TM3 631 aaKnown RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 ZBTB8OSQ8IWT0 167 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 VPS52Q8N1B4 723 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 MRPL43Q8N983 215 aaKnown RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 SMG8Q8ND04 991 aaKnown RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 VN1R2Q8NFZ6 395 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 IGSF21Q96ID5 467 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 CPB2Q96IY4 423 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 FAM193BQ96PV7 902 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 TMEM175Q9BSA9 504 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 TRIM6Q9C030 488 aaPredicted RBP5.3□□□□□ -1.56
CLK3-219ENST00000567805 ZBP1Q9H171 429 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 C2orf40Q9H1Z8 148 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 CD320Q9NPF0 282 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 GPRC5CQ9NQ84 441 aa5.3□□□□□ -1.56
CLK3-219ENST00000567805 PRMT7Q9NVM4 692 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms