RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PDIA5Q14554 519 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 TMEM132BQ14DG7 1078 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 TMEM266Q2M3C6 531 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 SUPT20HL1Q3ZLR7 823 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 HYIQ5T013 277 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 LDLRAD1Q5T700 205 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 MAP1SQ66K74 1059 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 NCAPH2Q6IBW4 605 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 KLHL10Q6JEL2 608 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 CATSPERGQ6ZRH7 1159 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 USP50Q70EL3 339 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 APTXQ7Z2E3 356 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 PDZD3Q86UT5 571 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 RASSF8Q8NHQ8 419 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 SYTL5Q8TDW5 730 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 ANP32BQ92688 251 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 RAD54LQ92698 747 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 CRELD1Q96HD1 420 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 TAAR1Q96RJ0 339 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 UBL7Q96S82 380 aaPredicted RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 TRIM9Q9C026 710 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 TRIM5Q9C035 493 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 XPO4Q9C0E2 1151 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 NAT10Q9H0A0 1025 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 SAMSN1Q9NSI8 373 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 RNF146Q9NTX7 359 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 INTS13Q9NVM9 706 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 IFNKQ9P0W0 207 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 CCDC39Q9UFE4 941 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 HOOK1Q9UJC3 728 aaKnown RBP6.4□□□□□ -1.38
SF3B3-210ENST00000567654 PPM1HQ9ULR3 514 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 PCDHA12Q9UN75 941 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 CTNND2Q9UQB3 1225 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 MAPK8IP1Q9UQF2 711 aa6.4□□□□□ -1.38
SF3B3-210ENST00000567654 SYNRGQ9UMZ2 1314 aa6.4□□□□□ -1.39
SF3B3-210ENST00000567654 NPHP3-ACAD11A0A0J9YXS1 232 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 TRIM49BA6NDI0 452 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 C19orf81C9J6K1 198 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 MEIS1O00470 390 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 PSMD10O75832 226 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 SMC2O95347 1197 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 GSTP1P09211 210 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 FCER1AP12319 257 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF18P17022 549 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 ITGB5P18084 799 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 NME2P22392 152 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 CCT6AP40227 531 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 PRCPP42785 496 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 PSMC6P62333 389 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 RPS6P62753 249 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 FANCCQ00597 558 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 TAF1CQ15572 869 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 TSNAXIP1Q2TAA8 658 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF658Q5TYW1 1059 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 PCNX4Q63HM2 1172 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 SNRNP48Q6IEG0 339 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 B3GNT9Q6UX72 402 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 DYMQ7RTS9 669 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 TMEM130Q8N3G9 435 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 MLKLQ8NB16 471 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 KIAA0895Q8NCT3 520 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 LARP4BQ92615 738 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 SLC5A5Q92911 643 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 TRIM44Q96DX7 344 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 MRRFQ96E11 262 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 CALML4Q96GE6 196 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 MRFAP1L1Q96HT8 127 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 NAP1L5Q96NT1 182 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 GSDMAQ96QA5 445 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 NAP1L4Q99733 375 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 C7orf25Q9BPX7 421 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 PYM1Q9BRP8 204 aaKnown RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 FGFBP2Q9BYJ0 223 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 CEP44Q9C0F1 390 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 UNC45AQ9H3U1 944 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 BCAS3Q9H6U6 928 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 ZFYVE1Q9HBF4 777 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 TPSG1Q9NRR2 321 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 BTBD7Q9P203 1132 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 WRAP73Q9P2S5 460 aaPredicted RBP6.39□□□□□ -1.39
SF3B3-210ENST00000567654 NFE2L3Q9Y4A8 694 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 TELO2Q9Y4R8 837 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 ASTN1O14525 1302 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 ANK1P16157 1881 aa6.39□□□□□ -1.39
SF3B3-210ENST00000567654 A0A0G2JLL6 359 aaPredicted RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 SMTNL1A8MU46 457 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 DDX39AO00148 427 aaKnown RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 TBX3O15119 743 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 NKRFO15226 690 aaKnown RBP eCLIP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF862O60290 1169 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 MARCH6O60337 910 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ZBED4O75132 1171 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 CNMDO75829 334 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 RHOBTB3O94955 611 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 PTMAP06454 111 aaKnown RBP6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ARNTP27540 789 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 ZNF76P36508 570 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 PREPP48147 710 aa6.38□□□□□ -1.39
SF3B3-210ENST00000567654 SLC12A3P55017 1021 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms