RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IPPQ9Y573 584 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 ZNF318Q5VUA4 2279 aa20.66■□□□□ 0.9
LINC01238-205ENST00000567549 INPPL1O15357 1258 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 TSPAN1O60635 241 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 SOD2P04179 222 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 NHLH1Q02575 133 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 CREMQ03060 361 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 CYP26C1Q6V0L0 522 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 NACC1Q96RE7 527 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 LLPHQ9BRT6 129 aaKnown RBP20.65■□□□□ 0.9
LINC01238-205ENST00000567549 COLEC11Q9BWP8 271 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 C2orf40Q9H1Z8 148 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 POMKQ9H5K3 350 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 STK24Q9Y6E0 443 aa20.65■□□□□ 0.9
LINC01238-205ENST00000567549 PIEZO1Q92508 2521 aa20.64■□□□□ 0.9
LINC01238-205ENST00000567549 NRP1O14786 923 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 C1RP00736 705 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 POMCP01189 267 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 MUTP22033 750 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 OR1G1P47890 313 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 RARRES1P49788 294 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 HMGN5P82970 282 aaKnown RBP20.64■□□□□ 0.89
LINC01238-205ENST00000567549 EARS2Q5JPH6 523 aaKnown RBP20.64■□□□□ 0.89
LINC01238-205ENST00000567549 UBXN11Q5T124 520 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 HAUS3Q68CZ6 603 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 SLC27A1Q6PCB7 646 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 C15orf39Q6ZRI6 1047 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 CCDC149Q6ZUS6 474 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 OTOP3Q7RTS5 596 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 TMEM173Q86WV6 379 aaPredicted RBP20.64■□□□□ 0.89
LINC01238-205ENST00000567549 ZNF280BQ86YH2 543 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 ZDHHC14Q8IZN3 488 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 RPS6KC1Q96S38 1066 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 XPNPEP1Q9NQW7 623 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 PRMT7Q9NVM4 692 aaPredicted RBP20.64■□□□□ 0.89
LINC01238-205ENST00000567549 LIMCH1Q9UPQ0 1083 aa20.64■□□□□ 0.89
LINC01238-205ENST00000567549 TDRD15B5MCY1 1934 aaKnown RBP20.63■□□□□ 0.89
LINC01238-205ENST00000567549 ARL5CA6NH57 179 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 MEIS3P2A8K0S8 358 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 ARL2P36404 184 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 GLUD2P49448 558 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 CAPSQ13938 189 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 TMEM132AQ24JP5 1023 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 APBB1IPQ7Z5R6 666 aaPredicted RBP20.63■□□□□ 0.89
LINC01238-205ENST00000567549 GPR65Q8IYL9 337 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 KREMEN2Q8NCW0 462 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 SLC22A17Q8WUG5 538 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 AUTS2Q8WXX7 1259 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 STAMQ92783 540 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 C8orf76Q96K31 380 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 ZSCAN31Q96LW9 406 aaPredicted RBP20.63■□□□□ 0.89
LINC01238-205ENST00000567549 MTMR9Q96QG7 549 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 HERC2P3Q9BVR0 1158 aa20.63■□□□□ 0.89
LINC01238-205ENST00000567549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.63■□□□□ 0.89
LINC01238-205ENST00000567549 NOL7Q9UMY1 257 aaKnown RBP20.63■□□□□ 0.89
LINC01238-205ENST00000567549 FAM205CA6NFA0 338 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 USO1O60763 962 aaKnown RBP20.62■□□□□ 0.89
LINC01238-205ENST00000567549 DDHD2O94830 711 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 EPCAMP16422 314 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 MCM7P33993 719 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 MLH1P40692 756 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 MBTD1Q05BQ5 628 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 PPP2R5AQ15172 486 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 FAM184AQ8NB25 1140 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 SMG8Q8ND04 991 aaKnown RBP20.62■□□□□ 0.89
LINC01238-205ENST00000567549 KLHL5Q96PQ7 755 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 ADPGKQ9BRR6 497 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 POLR3CQ9BUI4 534 aaPredicted RBP20.62■□□□□ 0.89
LINC01238-205ENST00000567549 RAB34Q9BZG1 259 aa20.62■□□□□ 0.89
LINC01238-205ENST00000567549 POLR3FQ9H1D9 316 aaPredicted RBP20.62■□□□□ 0.89
LINC01238-205ENST00000567549 FOXP1Q9H334 677 aaPredicted RBP20.62■□□□□ 0.89
LINC01238-205ENST00000567549 C2CD4DB7Z1M9 353 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 ZBTB39O15060 712 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 SSBP05455 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
LINC01238-205ENST00000567549 ARF4P18085 180 aaPredicted RBP20.61■□□□□ 0.89
LINC01238-205ENST00000567549 ATP2B1P20020 1258 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 SP100P23497 879 aaPredicted RBP20.61■□□□□ 0.89
LINC01238-205ENST00000567549 TRAPPC10P48553 1259 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 CLCN4P51793 760 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 GRIK3Q13003 919 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 GPR149Q86SP6 731 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 ALYREFQ86V81 257 aaKnown RBP20.61■□□□□ 0.89
LINC01238-205ENST00000567549 COLGALT2Q8IYK4 626 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 HDAC7Q8WUI4 952 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 GAD1Q99259 594 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 SH2B1Q9NRF2 756 aaPredicted RBP20.61■□□□□ 0.89
LINC01238-205ENST00000567549 PRG3Q9Y2Y8 225 aaPredicted RBP20.61■□□□□ 0.89
LINC01238-205ENST00000567549 KIF3AQ9Y496 699 aa20.61■□□□□ 0.89
LINC01238-205ENST00000567549 ARHGEF35A5YM69 484 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 N4BP3O15049 544 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 LARGE1O95461 756 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 GLUD1P00367 558 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 CNPP09543 421 aaKnown RBP20.6■□□□□ 0.89
LINC01238-205ENST00000567549 OR52Z1P0C646 297 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 GLRA2P23416 452 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 RBM25P49756 843 aaKnown RBP20.6■□□□□ 0.89
LINC01238-205ENST00000567549 MRE11P49959 708 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 DSC1Q08554 894 aa20.6■□□□□ 0.89
LINC01238-205ENST00000567549 TMC5Q6UXY8 1006 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms