RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 NPTXRO95502 500 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 ITGA4P13612 1032 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 SPOUT1Q5T280 376 aaKnown RBP23.82■■□□□ 1.4
NME3-210ENST00000567271 TAS1R3Q7RTX0 852 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 TMEM161BQ8NDZ6 487 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 P2RX5Q93086 422 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 SPATA32Q96LK8 384 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 C11orf84Q9BUA3 381 aaPredicted RBP23.82■■□□□ 1.4
NME3-210ENST00000567271 MRPL9Q9BYD2 267 aaKnown RBP23.82■■□□□ 1.4
NME3-210ENST00000567271 TRIM6Q9C030 488 aaPredicted RBP23.82■■□□□ 1.4
NME3-210ENST00000567271 RNF39Q9H2S5 420 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 UBN1Q9NPG3 1134 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 HES2Q9Y543 173 aa23.82■■□□□ 1.4
NME3-210ENST00000567271 MYMKA6NI61 221 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 N4BP3O15049 544 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 NCKAP1LP55160 1127 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 E2F4Q16254 413 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 TMEM132AQ24JP5 1023 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 RESP18Q5W5W9 173 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 MYCT1Q8N699 235 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 RSAD1Q9HA92 442 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 PARVGQ9HBI0 331 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 AAASQ9NRG9 546 aa23.81■■□□□ 1.4
NME3-210ENST00000567271 COL4A4P53420 1690 aaPredicted RBP23.8■■□□□ 1.4
NME3-210ENST00000567271 TBCAO75347 108 aaKnown RBP23.8■■□□□ 1.4
NME3-210ENST00000567271 MAPTP10636 758 aaKnown RBP23.8■■□□□ 1.4
NME3-210ENST00000567271 NOMO2Q5JPE7 1267 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 ATF7IP2Q5U623 682 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 EEF1DP3Q658K8 133 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 DYMQ7RTS9 669 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 DDX12PQ92771 950 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 KCNN1Q92952 543 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 NXF3Q9H4D5 531 aaKnown RBP23.8■■□□□ 1.4
NME3-210ENST00000567271 TNFSF13BQ9Y275 285 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 PCDHB12Q9Y5F1 795 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 MYH11P35749 1972 aa23.8■■□□□ 1.4
NME3-210ENST00000567271 EYSQ5T1H1 3165 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 LAG3P18627 525 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 HACE1Q8IYU2 909 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 IQUBQ8NA54 791 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 KLHL23Q8NBE8 558 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 COLGALT1Q8NBJ5 622 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 DNAJC19Q96DA6 116 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 ACO2Q99798 780 aaKnown RBP23.79■■□□□ 1.4
NME3-210ENST00000567271 MRPL4Q9BYD3 311 aaKnown RBP23.79■■□□□ 1.4
NME3-210ENST00000567271 SCAND2PQ9GZW5 306 aaPredicted RBP23.79■■□□□ 1.4
NME3-210ENST00000567271 CUEDC2Q9H467 287 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 ZHX3Q9H4I2 956 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 TBC1D13Q9NVG8 400 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 FAM13BQ9NYF5 915 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 PLAGL2Q9UPG8 496 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 INPP5FQ9Y2H2 1132 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 KIAA1671Q9BY89 1806 aa23.79■■□□□ 1.4
NME3-210ENST00000567271 PRRC2BQ5JSZ5 2229 aaKnown RBP23.79■■□□□ 1.4
NME3-210ENST00000567271 H0YCG3 227 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 GRM6O15303 877 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 TRAK2O60296 914 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 ITGB1P05556 798 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 AFF1P51825 1210 aaKnown RBP23.78■■□□□ 1.4
NME3-210ENST00000567271 STRN3Q13033 797 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 HAUS6Q7Z4H7 955 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 URGCPQ8TCY9 931 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 DHX58Q96C10 678 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 ADPGKQ9BRR6 497 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 APOL6Q9BWW8 343 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 PTPRHQ9HD43 1115 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 ALG13Q9NP73 1137 aaKnown RBP23.78■■□□□ 1.4
NME3-210ENST00000567271 GIT1Q9Y2X7 761 aa23.78■■□□□ 1.4
NME3-210ENST00000567271 INPPL1O15357 1258 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 SCP2P22307 547 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 AKAP5P24588 427 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 PTPROQ16827 1216 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 CSPP1Q1MSJ5 1256 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 DCAF4L1Q3SXM0 396 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 ADALQ6DHV7 355 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 KCNT2Q6UVM3 1135 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 PPM1EQ8WY54 764 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 MRPL38Q96DV4 380 aaKnown RBP23.77■■□□□ 1.4
NME3-210ENST00000567271 FIZ1Q96SL8 496 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 TARS2Q9BW92 718 aaKnown RBP23.77■■□□□ 1.4
NME3-210ENST00000567271 LMAN2LQ9H0V9 348 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 TNMDQ9H2S6 317 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 KBTBD4Q9NVX7 518 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 KANSL3Q9P2N6 904 aa23.77■■□□□ 1.4
NME3-210ENST00000567271 ARL5CA6NH57 179 aa23.76■■□□□ 1.39
NME3-210ENST00000567271 POLR2DO15514 142 aaKnown RBP23.76■■□□□ 1.39
NME3-210ENST00000567271 CCDC85BQ15834 202 aaPredicted RBP23.76■■□□□ 1.39
NME3-210ENST00000567271 MICALL1Q8N3F8 863 aa23.76■■□□□ 1.39
NME3-210ENST00000567271 SPPL3Q8TCT6 385 aa23.76■■□□□ 1.39
NME3-210ENST00000567271 ZNF558Q96NG5 402 aa23.76■■□□□ 1.39
NME3-210ENST00000567271 GAD1Q99259 594 aa23.76■■□□□ 1.39
NME3-210ENST00000567271 NRDE2Q9H7Z3 1164 aa23.76■■□□□ 1.39
NME3-210ENST00000567271 PARP2Q9UGN5 583 aa23.76■■□□□ 1.39
NME3-210ENST00000567271 K7ENM7 598 aa23.75■■□□□ 1.39
NME3-210ENST00000567271 FGF18O76093 207 aa23.75■■□□□ 1.39
NME3-210ENST00000567271 PROZP22891 400 aa23.75■■□□□ 1.39
NME3-210ENST00000567271 CMA1P23946 247 aa23.75■■□□□ 1.39
NME3-210ENST00000567271 PBX3P40426 434 aa23.75■■□□□ 1.39
NME3-210ENST00000567271 MLH1P40692 756 aa23.75■■□□□ 1.39
NME3-210ENST00000567271 RNASELQ05823 741 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms