RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 PLCB3Q01970 1234 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 SMAD4Q13485 552 aaKnown RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 CAMK1Q14012 370 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 TFDP1Q14186 410 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 MXD4Q14582 209 aaPredicted RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 EMC2Q15006 297 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 TMEM31Q5JXX7 168 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 PLPP4Q5VZY2 271 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 TMC7Q7Z402 723 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 ADGRD2Q7Z7M1 963 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 KSR1Q8IVT5 923 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 CCDC83Q8IWF9 413 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 ADHFE1Q8IWW8 467 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 URGCPQ8TCY9 931 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 PRPF31Q8WWY3 499 aaKnown RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 TMEM143Q96AN5 459 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 TMEM169Q96HH4 297 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 FAM193BQ96PV7 902 aaPredicted RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 EIF2AK1Q9BQI3 630 aaKnown RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 LLPHQ9BRT6 129 aaKnown RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 EPHX3Q9H6B9 360 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 DHX33Q9H6R0 707 aaKnown RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 NGRNQ9NPE2 291 aaKnown RBP11.55□□□□□ -0.56
LINC00564-201ENST00000567258 FAM105AQ9NUU6 356 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
LINC00564-201ENST00000567258 LINC01565O15544 149 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 MBTPS2O43462 519 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 ZC3H11AO75152 810 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00564-201ENST00000567258 LTBRP36941 435 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 HMGN5P82970 282 aaKnown RBP11.54□□□□□ -0.56
LINC00564-201ENST00000567258 LAMTOR4Q0VGL1 99 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 SMAD2Q15796 467 aaKnown RBP11.54□□□□□ -0.56
LINC00564-201ENST00000567258 EARS2Q5JPH6 523 aaKnown RBP11.54□□□□□ -0.56
LINC00564-201ENST00000567258 RNF149Q8NC42 400 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 ERMNQ8TAM6 284 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 TCF25Q9BQ70 676 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 TRAIPQ9BWF2 469 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 SH2B1Q9NRF2 756 aaPredicted RBP11.54□□□□□ -0.56
LINC00564-201ENST00000567258 INPP5FQ9Y2H2 1132 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 HCN4Q9Y3Q4 1203 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 KIF3AQ9Y496 699 aa11.54□□□□□ -0.56
LINC00564-201ENST00000567258 PI4K2BG5E9Z4 385 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 PER2O15055 1255 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 TBX10O75333 385 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 SLITRK3O94933 977 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 MCM7P33993 719 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 ERVFC1P60507 584 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 GUCY1B3Q02153 619 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
LINC00564-201ENST00000567258 SMC1AQ14683 1233 aaKnown RBP11.53□□□□□ -0.56
LINC00564-201ENST00000567258 PCBP1Q15365 356 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC00564-201ENST00000567258 LONRF3Q496Y0 759 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 NOMO2Q5JPE7 1267 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 CLLU1OSQ5K130 101 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 LRRC55Q6ZSA7 311 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 FERMT3Q86UX7 667 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 HACE1Q8IYU2 909 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 CNNM3Q8NE01 707 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 TNFRSF25Q93038 417 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 GBP3Q9H0R5 595 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
LINC00564-201ENST00000567258 IFT122Q9HBG6 1241 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 ANKEF1Q9NU02 776 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 AGPAT5Q9NUQ2 364 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
LINC00564-201ENST00000567258 NOL7Q9UMY1 257 aaKnown RBP11.53□□□□□ -0.56
LINC00564-201ENST00000567258 INO80B-WBP1J3KQ70 363 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 DCXO43602 365 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 ZNF623O75123 536 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 AXLP30530 894 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 PBX3P40426 434 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 RBM25P49756 843 aaKnown RBP11.52□□□□□ -0.57
LINC00564-201ENST00000567258 BCAR1P56945 870 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 ZP2Q05996 745 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 SPIRE1Q08AE8 756 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 COASYQ13057 564 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 ORC2Q13416 577 aaPredicted RBP11.52□□□□□ -0.57
LINC00564-201ENST00000567258 GIT2Q14161 759 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 DUSP6Q16828 381 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 FAM160A2Q8N612 972 aaPredicted RBP11.52□□□□□ -0.57
LINC00564-201ENST00000567258 RDH13Q8NBN7 331 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 LPPQ93052 612 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.57
LINC00564-201ENST00000567258 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
LINC00564-201ENST00000567258 CD320Q9NPF0 282 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 RNF19AQ9NV58 838 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 WRAP73Q9P2S5 460 aaPredicted RBP11.52□□□□□ -0.57
LINC00564-201ENST00000567258 STK39Q9UEW8 545 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 BARX2Q9UMQ3 279 aaPredicted RBP11.52□□□□□ -0.57
LINC00564-201ENST00000567258 PCDHB2Q9Y5E7 798 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 PCDHGC5Q9Y5F6 944 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 CNTNAP2Q9UHC6 1331 aa11.52□□□□□ -0.57
LINC00564-201ENST00000567258 MYH11P35749 1972 aa11.51□□□□□ -0.57
LINC00564-201ENST00000567258 NT5C1B-RDH14C9J2C7 533 aa11.51□□□□□ -0.57
LINC00564-201ENST00000567258 FSCN2O14926 492 aa11.51□□□□□ -0.57
LINC00564-201ENST00000567258 ZBTB39O15060 712 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms