RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 FBXL18Q96ME1 805 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 POLR3FQ9H1D9 316 aaPredicted RBP25.23■■□□□ 1.63
LINC00543-201ENST00000567234 DNAJC12Q9UKB3 198 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 PNMA3Q9UL41 463 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 CAPN6Q9Y6Q1 641 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 EMSYQ7Z589 1322 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 ANKRD63C9JTQ0 380 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 F8VZ95 297 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 ENC1O14682 589 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 GARTP22102 1010 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 RFC5P40937 340 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 SUGP1Q8IWZ8 645 aaKnown RBP25.22■■□□□ 1.63
LINC00543-201ENST00000567234 SEPT1Q8WYJ6 367 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 MMP19Q99542 508 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 MLXIPQ9HAP2 919 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 NRBP2Q9NSY0 501 aa25.22■■□□□ 1.63
LINC00543-201ENST00000567234 PUF60Q9UHX1 559 aaKnown RBP25.22■■□□□ 1.63
LINC00543-201ENST00000567234 SIP14410 1827 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 SORBS3O60504 671 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 GTF2A1P52655 376 aaPredicted RBP25.21■■□□□ 1.63
LINC00543-201ENST00000567234 Q3C1V9 767 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 C1orf220Q5T0J3 134 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 MORC4Q8TE76 937 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 MS4A4AQ96JQ5 239 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 RPGRIP1Q96KN7 1286 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 FGD4Q96M96 766 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 KIFC3Q9BVG8 833 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 PORCNQ9H237 461 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 MOCS3O95396 460 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 SOX10P56693 466 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 DLG4P78352 724 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 CKAP4Q07065 602 aaKnown RBP25.21■■□□□ 1.63
LINC00543-201ENST00000567234 PPP3CAQ08209 521 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 DRAP1Q14919 205 aaPredicted RBP25.21■■□□□ 1.63
LINC00543-201ENST00000567234 SNRNP35Q16560 246 aaKnown RBP25.21■■□□□ 1.63
LINC00543-201ENST00000567234 EPC2Q52LR7 807 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 GJB7Q6PEY0 223 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 USP37Q86T82 979 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 EFCAB13Q8IY85 973 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 TMC2Q8TDI7 906 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 CEP89Q96ST8 783 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 NENFQ9UMX5 172 aa25.21■■□□□ 1.63
LINC00543-201ENST00000567234 ADGRA3Q8IWK6 1321 aa25.2■■□□□ 1.63
LINC00543-201ENST00000567234 TARBP2Q15633 366 aaKnown RBP25.2■■□□□ 1.62
LINC00543-201ENST00000567234 SPRYD7Q5W111 196 aa25.2■■□□□ 1.62
LINC00543-201ENST00000567234 WDR93Q6P2C0 686 aa25.2■■□□□ 1.62
LINC00543-201ENST00000567234 PCYT2Q99447 389 aa25.2■■□□□ 1.62
LINC00543-201ENST00000567234 ANKZF1Q9H8Y5 726 aa25.2■■□□□ 1.62
LINC00543-201ENST00000567234 HDAC6Q9UBN7 1215 aa25.2■■□□□ 1.62
LINC00543-201ENST00000567234 NAGPAQ9UK23 515 aa25.2■■□□□ 1.62
LINC00543-201ENST00000567234 GGPS1O95749 300 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 NAMPTP43490 491 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 AARSP49588 968 aaKnown RBP eCLIP25.19■■□□□ 1.62
LINC00543-201ENST00000567234 STAT5BP51692 787 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 ERVK-9P63128 1117 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 ENOX2Q16206 610 aaKnown RBP25.19■■□□□ 1.62
LINC00543-201ENST00000567234 KIAA0753Q2KHM9 967 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 SLC39A4Q6P5W5 647 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 SLC7A3Q8WY07 619 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 FAM167AQ96KS9 214 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 MFSD14AQ96MC6 490 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 VPS18Q9P253 973 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 LCMT1Q9UIC8 334 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 SALL4Q9UJQ4 1053 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 INTUQ9ULD6 942 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 SNX12Q9UMY4 172 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 SLC45A1Q9Y2W3 748 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 KIAA0391O15091 583 aaKnown RBP25.19■■□□□ 1.62
LINC00543-201ENST00000567234 EVI5O60447 810 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 ADRB2P07550 413 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 GTF2H1P32780 548 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 ARL2P36404 184 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 PLEKHO2Q8TD55 490 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 PDE11AQ9HCR9 933 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 TSKSQ9UJT2 592 aa25.19■■□□□ 1.62
LINC00543-201ENST00000567234 TRIM66O15016 1216 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 PPFIA4O75335 1185 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 MXI1P50539 228 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 PHLDB3Q6NSJ2 640 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 ALKBH5Q6P6C2 394 aaKnown RBP25.18■■□□□ 1.62
LINC00543-201ENST00000567234 SAPCD2Q86UD0 394 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 CBWD2Q8IUF1 395 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 PARD3BQ8TEW8 1205 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 BRI3BPQ8WY22 251 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 POMGNT1Q8WZA1 660 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 GPR88Q9GZN0 384 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 R3HDMLQ9H3Y0 253 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 KIAA1586Q9HCI6 787 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 MCM3APO60318 1980 aa25.18■■□□□ 1.62
LINC00543-201ENST00000567234 CCL15-CCL14A0A0B4J2E2 113 aa25.17■■□□□ 1.62
LINC00543-201ENST00000567234 HNRNPDLO14979 420 aaKnown RBP25.17■■□□□ 1.62
LINC00543-201ENST00000567234 PGK2P07205 417 aa25.17■■□□□ 1.62
LINC00543-201ENST00000567234 TCP1P17987 556 aaKnown RBP25.17■■□□□ 1.62
LINC00543-201ENST00000567234 GCLMP48507 274 aa25.17■■□□□ 1.62
LINC00543-201ENST00000567234 CCL15Q16663 113 aa25.17■■□□□ 1.62
LINC00543-201ENST00000567234 SWT1Q5T5J6 900 aaKnown RBP25.17■■□□□ 1.62
LINC00543-201ENST00000567234 TAS1R3Q7RTX0 852 aa25.17■■□□□ 1.62
LINC00543-201ENST00000567234 ZSWIM2Q8NEG5 633 aa25.17■■□□□ 1.62
LINC00543-201ENST00000567234 TMEM117Q9H0C3 514 aa25.17■■□□□ 1.62
LINC00543-201ENST00000567234 COQ4Q9Y3A0 265 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms