RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 AGO3Q9H9G7 860 aaKnown RBP18.4■□□□□ 0.54
CLN6-208ENST00000567060 LMBRD1Q9NUN5 540 aa18.4■□□□□ 0.54
CLN6-208ENST00000567060 PANK4Q9NVE7 773 aa18.4■□□□□ 0.54
CLN6-208ENST00000567060 DACT1Q9NYF0 836 aa18.4■□□□□ 0.54
CLN6-208ENST00000567060 LMCD1Q9NZU5 365 aa18.4■□□□□ 0.54
CLN6-208ENST00000567060 ST3GAL5Q9UNP4 418 aa18.4■□□□□ 0.54
CLN6-208ENST00000567060 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.39■□□□□ 0.53
CLN6-208ENST00000567060 INO80B-WBP1J3KQ70 363 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 K7ERI5 159 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 NR1I2O75469 434 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 IDEP14735 1019 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 ZSCAN20P17040 1043 aaPredicted RBP18.39■□□□□ 0.53
CLN6-208ENST00000567060 MBTD1Q05BQ5 628 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 RAD51AP2Q09MP3 1159 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 CATSPER4Q7RTX7 472 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 GDPD5Q8WTR4 605 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 PPP1R16BQ96T49 567 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 TRAIPQ9BWF2 469 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 C1orf112Q9NSG2 853 aa18.39■□□□□ 0.53
CLN6-208ENST00000567060 NPHP3-ACAD11A0A0J9YXS1 232 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 ACKR2O00590 384 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 MBD3O95983 291 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 SKIP12755 728 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 CD52P31358 61 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 AFMP43652 599 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 NFX1Q12986 1120 aaKnown RBP18.38■□□□□ 0.53
CLN6-208ENST00000567060 PSMD2Q13200 908 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 POSTNQ15063 836 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 HERC4Q5GLZ8 1057 aaPredicted RBP18.38■□□□□ 0.53
CLN6-208ENST00000567060 TMEM161BQ8NDZ6 487 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 RSPH1Q8WYR4 309 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 CCDC113Q9H0I3 377 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 ZHX3Q9H4I2 956 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 AGPAT5Q9NUQ2 364 aa18.38■□□□□ 0.53
CLN6-208ENST00000567060 SFI1A8K8P3 1242 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 LIG1P18858 919 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 KCNJ6P48051 423 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 GTF2BQ00403 316 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 CACNB1Q02641 598 aaPredicted RBP18.37■□□□□ 0.53
CLN6-208ENST00000567060 STRN3Q13033 797 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 COASYQ13057 564 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 KCNB1Q14721 858 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 APBB1IPQ7Z5R6 666 aaPredicted RBP18.37■□□□□ 0.53
CLN6-208ENST00000567060 STAMQ92783 540 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 FIZ1Q96SL8 496 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 PCDHB13Q9Y5F0 798 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 CNTNAP2Q9UHC6 1331 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
CLN6-208ENST00000567060 K7ENM7 598 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 UBE4BO95155 1302 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 SMC2O95347 1197 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 GJB5O95377 273 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 PRKCBP05771 671 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 RAB27AP51159 221 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 COL4A4P53420 1690 aaPredicted RBP18.36■□□□□ 0.53
CLN6-208ENST00000567060 ERVK-21P61565 698 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 EHHADHQ08426 723 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 DPYDQ12882 1025 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 CUL4BQ13620 913 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 DSC3Q14574 896 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 NOTUMQ6P988 496 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 ZNF720Q7Z2F6 126 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.36■□□□□ 0.53
CLN6-208ENST00000567060 ZNF668Q96K58 619 aaPredicted RBP18.36■□□□□ 0.53
CLN6-208ENST00000567060 GSDMAQ96QA5 445 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 RAD9AQ99638 391 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 ZBED2Q9BTP6 218 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 MRPL4Q9BYD3 311 aaKnown RBP18.36■□□□□ 0.53
CLN6-208ENST00000567060 UBE2ZQ9H832 354 aaPredicted RBP18.36■□□□□ 0.53
CLN6-208ENST00000567060 MINDY3Q9H8M7 445 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 MRPL44Q9H9J2 332 aaKnown RBP18.36■□□□□ 0.53
CLN6-208ENST00000567060 RGS18Q9NS28 235 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 RMND1Q9NWS8 449 aa18.36■□□□□ 0.53
CLN6-208ENST00000567060 DENND3A2RUS2 1198 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 LINC01553A4QN01 128 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 EIF3DO15371 548 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLN6-208ENST00000567060 SLC16A4O15374 487 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 TSPAN1O60635 241 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 MCM4P33991 863 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 PRPF4BQ13523 1007 aaKnown RBP18.35■□□□□ 0.53
CLN6-208ENST00000567060 AMHR2Q16671 573 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 FAM26FQ5R3K3 315 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 ZPBP2Q6X784 338 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 SLC24A5Q71RS6 500 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 SPATA20Q8TB22 786 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
CLN6-208ENST00000567060 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 MTUS1Q9ULD2 1270 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 EXOC7Q9UPT5 735 aa18.35■□□□□ 0.53
CLN6-208ENST00000567060 A0A1B0GUA9 196 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 N4BP3O15049 544 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 PPP1R37O75864 691 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 KIF20AO95235 890 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 PIGRP01833 764 aa18.34■□□□□ 0.53
CLN6-208ENST00000567060 AMHP03971 560 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms