RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 NPTXRO95502 500 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 EOMESO95936 686 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 SSBP05455 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 GLRA2P23416 452 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 PPM1AP35813 382 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 ALDH7A1P49419 539 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 BCAR1P56945 870 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 ERVFC1P60507 584 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 KRT17Q04695 432 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 MBTD1Q05BQ5 628 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 DLX2Q07687 328 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 CSPP1Q1MSJ5 1256 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 NOMO2Q5JPE7 1267 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 TMC7Q7Z402 723 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 ZBTB8OSQ8IWT0 167 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 PGBD4Q96DM1 585 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 TMEM169Q96HH4 297 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 NACC1Q96RE7 527 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 PLIN2Q99541 437 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 RAB34Q9BZG1 259 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 RSAD1Q9HA92 442 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 DDX19AQ9NUU7 478 aaKnown RBP11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 TBC1D13Q9NVG8 400 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 CD207Q9UJ71 328 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 KIAA1024Q9UPX6 916 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 HES2Q9Y543 173 aa11.21□□□□□ -0.61
GTF3C1-206ENST00000566779 A0A0C4DFX4 3053 aa11.21□□□□□ -0.62
GTF3C1-206ENST00000566779 PLXNA3P51805 1871 aa11.21□□□□□ -0.62
GTF3C1-206ENST00000566779 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 POMCP01189 267 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 ITGA4P13612 1032 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 U2AF2P26368 475 aaKnown RBP eCLIP11.2□□□□□ -0.628e-6■■■■□ 25
GTF3C1-206ENST00000566779 CDC25AP30304 524 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 MLH1P40692 756 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 MCM2P49736 904 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 TOB1P50616 345 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 PRSS12P56730 875 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 PTENP60484 403 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 NOTUMQ6P988 496 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 MCPH1Q8NEM0 835 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 DEPTORQ8TB45 409 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 AUTS2Q8WXX7 1259 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 MRPS27Q92552 414 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 KIFC3Q9BVG8 833 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 DNAJB4Q9UDY4 337 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 FAM50BQ9Y247 325 aa11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 PRG3Q9Y2Y8 225 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-206ENST00000566779 BDP1A6H8Y1 2624 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 VWA3AA6NCI4 1184 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 HIDE1A8MVS5 230 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 E9PMD0 336 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 NCK2O43639 380 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 ARF4P18085 180 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 SP100P23497 879 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 RPA1P27694 616 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 ARL2P36404 184 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 LTBRP36941 435 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 UBE3AQ05086 875 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 RAD51AP2Q09MP3 1159 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 ECM1Q16610 540 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 LARP1BQ659C4 914 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 DTHD1Q6ZMT9 781 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 FAM43BQ6ZT52 329 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 TMEM173Q86WV6 379 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 SLC39A11Q8N1S5 342 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 EFHBQ8N7U6 833 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 RASSF8Q8NHQ8 419 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 BSNDQ8WZ55 320 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 CDK5RAP3Q96JB5 506 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 NXF3Q9H4D5 531 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 KLK14Q9P0G3 267 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 PARP2Q9UGN5 583 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 DBR1Q9UK59 544 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 USP20Q9Y2K6 914 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 IPPQ9Y573 584 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 C2orf16Q68DN1 1984 aa11.19□□□□□ -0.62
GTF3C1-206ENST00000566779 CCDC169A6NNP5 214 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 B4GALT3O60512 393 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 OFD1O75665 1012 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 GLP2RO95838 553 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 PRKCBP05771 671 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 SRGAP2BP0DMP2 458 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 AKAP5P24588 427 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 HOXA11P31270 313 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 OR1G1P47890 313 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 SLC11A1P49279 550 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 SCNN1GP51170 649 aa11.18□□□□□ -0.62
GTF3C1-206ENST00000566779 AFF1P51825 1210 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms