RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 DOK3Q7L591 496 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 ZNF276Q8N554 614 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 OR52N2Q8NGI0 321 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 LENG9Q96B70 501 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 CEP89Q96ST8 783 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
NAE1-216ENST00000566663 EPC1Q9H2F5 836 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 KCTD10Q9H3F6 313 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 IFT22Q9H7X7 185 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 CDY2AQ9Y6F7 541 aa5.87□□□□□ -1.47
NAE1-216ENST00000566663 ZEB2O60315 1214 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 TMEM127O75204 238 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 GYPEP15421 78 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 PTGS2P35354 604 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 ID4P47928 161 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 SESN3P58005 492 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 MEF2AQ02078 507 aaPredicted RBP5.86□□□□□ -1.47
NAE1-216ENST00000566663 PDCD1Q15116 288 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 VPS72Q15906 364 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 DDX46Q7L014 1031 aaKnown RBP5.86□□□□□ -1.47
NAE1-216ENST00000566663 RHOUQ7L0Q8 258 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 MRGPREQ86SM8 312 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 FAM83AQ86UY5 434 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 ULK2Q8IYT8 1036 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 GLB1L3Q8NCI6 653 aaPredicted RBP5.86□□□□□ -1.47
NAE1-216ENST00000566663 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 HAS1Q92839 578 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 PRRX2Q99811 253 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 TOPORSQ9NS56 1045 aaPredicted RBP5.86□□□□□ -1.47
NAE1-216ENST00000566663 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.86□□□□□ -1.47
NAE1-216ENST00000566663 SORCS3Q9UPU3 1222 aa5.86□□□□□ -1.47
NAE1-216ENST00000566663 A0A087X1B8 175 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 TRIM24O15164 1050 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 PRAMEF4O60810 478 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 KRT4P19013 534 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 LGALS4P56470 323 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 C19orf54Q5BKX5 351 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 CT83Q5H943 113 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 MRGPRGQ86SM5 289 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 TTC1Q99614 292 aa5.85□□□□□ -1.47
NAE1-216ENST00000566663 APOBEC2Q9Y235 224 aaKnown RBP5.85□□□□□ -1.47
NAE1-216ENST00000566663 TLDC2A0PJX2 215 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 ULK1O75385 1050 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 LPLP06858 475 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 NR4A1P22736 598 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 STRN3Q13033 797 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 FSCN1Q16658 493 aaKnown RBP5.84□□□□□ -1.47
NAE1-216ENST00000566663 ABHD15Q6UXT9 468 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 GPRIN1Q7Z2K8 1008 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 HDGFL2Q7Z4V5 671 aaPredicted RBP5.84□□□□□ -1.47
NAE1-216ENST00000566663 STRA8Q7Z7C7 330 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
NAE1-216ENST00000566663 CPT1CQ8TCG5 803 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 SNX33Q8WV41 574 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 ACAP3Q96P50 834 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 KCNH6Q9H252 994 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 USP35Q9P2H5 1018 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 HDAC5Q9UQL6 1122 aa5.84□□□□□ -1.47
NAE1-216ENST00000566663 OVOL3O00110 214 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 RECQL4O94761 1208 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 SCAF4O95104 1147 aaKnown RBP5.83□□□□□ -1.48
NAE1-216ENST00000566663 ENPP1P22413 925 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 UGT8Q16880 541 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 PCSK4Q6UW60 755 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 SYNE4Q8N205 404 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 UBR7Q8N806 425 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 EAF2Q96CJ1 260 aaPredicted RBP5.83□□□□□ -1.48
NAE1-216ENST00000566663 NDC1Q9BTX1 674 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 SLKQ9H2G2 1235 aaPredicted RBP5.83□□□□□ -1.48
NAE1-216ENST00000566663 CAAP1Q9H8G2 361 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 FZD1Q9UP38 647 aa5.83□□□□□ -1.48
NAE1-216ENST00000566663 AHRRA9YTQ3 701 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 PRR5-ARHGAP8B1AHC4 643 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 ITGB1P05556 798 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 HSP90B1P14625 803 aaKnown RBP5.82□□□□□ -1.48
NAE1-216ENST00000566663 CTSSP25774 331 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 HSD3B2P26439 372 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 APOBEC3AP31941 199 aaPredicted RBP5.82□□□□□ -1.48
NAE1-216ENST00000566663 SOX5P35711 763 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 PTTG1IPP53801 180 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 INHBEP58166 350 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 APBA1Q02410 837 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.82□□□□□ -1.48
NAE1-216ENST00000566663 IQSEC1Q6DN90 963 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 LRRC55Q6ZSA7 311 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 XYLT1Q86Y38 959 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 RPUSD2Q8IZ73 545 aaKnown RBP5.82□□□□□ -1.48
NAE1-216ENST00000566663 RAX2Q96IS3 184 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 PAWRQ96IZ0 340 aaKnown RBP5.82□□□□□ -1.48
NAE1-216ENST00000566663 CDC5LQ99459 802 aaKnown RBP5.82□□□□□ -1.48
NAE1-216ENST00000566663 GPRC5DQ9NZD1 345 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 C11orf21Q9P2W6 132 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 EIF2B4Q9UI10 523 aaKnown RBP5.82□□□□□ -1.48
NAE1-216ENST00000566663 CLCA2Q9UQC9 943 aa5.82□□□□□ -1.48
NAE1-216ENST00000566663 TMA7Q9Y2S6 64 aaKnown RBP5.82□□□□□ -1.48
NAE1-216ENST00000566663 FOXN1O15353 648 aa5.81□□□□□ -1.48
NAE1-216ENST00000566663 PPFIA4O75335 1185 aa5.81□□□□□ -1.48
NAE1-216ENST00000566663 ITGA10O75578 1167 aa5.81□□□□□ -1.48
NAE1-216ENST00000566663 GASTP01350 101 aa5.81□□□□□ -1.48
NAE1-216ENST00000566663 ZFP36P26651 326 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms